RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ITPKBP27987 946 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 FMO3P31513 532 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 PSMD4P55036 377 aaKnown RBP12.68□□□□□ -0.38
USP38-201ENST00000307017 SLC6A3Q01959 620 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 ECM1Q16610 540 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 LINGO4Q6UY18 593 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 SCAIQ8N9R8 606 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 OR52L1Q8NGH7 329 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 HDAC2Q92769 488 aaKnown RBP12.68□□□□□ -0.38
USP38-201ENST00000307017 REPS1Q96D71 796 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 FNDC11Q9BVV2 318 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 STARD7Q9NQZ5 370 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 SALL1Q9NSC2 1324 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 TBC1D3BA6NDS4 549 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 MTA2O94776 668 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 AMD1P17707 334 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 ADSSP30520 456 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 AKT2P31751 481 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 SREBF1P36956 1147 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 CDADC1Q9BWV3 514 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 MMADHCQ9H3L0 296 aaPredicted RBP12.68□□□□□ -0.38
USP38-201ENST00000307017 ZMYM2Q9UBW7 1377 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 MTRF1O75570 445 aaKnown RBP12.68□□□□□ -0.38
USP38-201ENST00000307017 SLC25A12O75746 678 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 CCNKO75909 580 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 CDC42P60953 191 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 NAA20P61599 178 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 PRMT9Q6P2P2 845 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 SETD9Q8NE22 299 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 SPHKAPQ2M3C7 1700 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 CROCC2H7BZ55 1655 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 DDX3YO15523 660 aaKnown RBP12.68□□□□□ -0.38
USP38-201ENST00000307017 LIASO43766 372 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 LTA4HP09960 611 aaKnown RBP12.68□□□□□ -0.38
USP38-201ENST00000307017 VARSP26640 1264 aaKnown RBP12.68□□□□□ -0.38
USP38-201ENST00000307017 ARMC12Q5T9G4 340 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 RHBDF2Q6PJF5 856 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 AHSA2Q719I0 299 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 CHST4Q8NCG5 386 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 SNRNP25Q9BV90 132 aaKnown RBP12.68□□□□□ -0.38
USP38-201ENST00000307017 SNX15Q9NRS6 342 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.68□□□□□ -0.38
USP38-201ENST00000307017 NDUFA13Q9P0J0 144 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 PDP1Q9P0J1 537 aaPredicted RBP12.68□□□□□ -0.38
USP38-201ENST00000307017 XPR1Q9UBH6 696 aa12.68□□□□□ -0.38
USP38-201ENST00000307017 C9IYK1 514 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 UNC5CO95185 931 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 OR4Q2P0C623 313 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 LHX1P48742 406 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 CCL23P55773 120 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 GJA9P57773 515 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 COPZ1P61923 177 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 ODF4Q2M2E3 257 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 SPDYCQ5MJ68 293 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 FAAH2Q6GMR7 532 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 DNAJB7Q7Z6W7 309 aaPredicted RBP12.67□□□□□ -0.38
USP38-201ENST00000307017 LZTR1Q8N653 840 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 S100ZQ8WXG8 99 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 SMARCD1Q96GM5 515 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 AARSD1Q9BTE6 412 aaKnown RBP12.67□□□□□ -0.38
USP38-201ENST00000307017 FBXL21Q9UKT6 434 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 NARSO43776 548 aaKnown RBP12.67□□□□□ -0.38
USP38-201ENST00000307017 RECQL4O94761 1208 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 EGFRP00533 1210 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 CCNB1P14635 433 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 PSMA3P25788 255 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 KIAA0319LQ8IZA0 1049 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 GAL3ST3Q96A11 431 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 GJD4Q96KN9 370 aaPredicted RBP12.67□□□□□ -0.38
USP38-201ENST00000307017 CHCHD6Q9BRQ6 235 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 ZSCAN5AQ9BUG6 496 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 MCIDASD6RGH6 385 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 B4GALT5O43286 388 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 MYL9P24844 172 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 IRF8Q02556 426 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.67□□□□□ -0.38
USP38-201ENST00000307017 PREPLQ4J6C6 727 aaPredicted RBP12.67□□□□□ -0.38
USP38-201ENST00000307017 DSELQ8IZU8 1212 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 FAM81AQ8TBF8 368 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 MRPL48Q96GC5 212 aaKnown RBP12.67□□□□□ -0.38
USP38-201ENST00000307017 TSSK3Q96PN8 268 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 NLNQ9BYT8 704 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 TBC1D17Q9HA65 648 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 PSMD13Q9UNM6 376 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 FCGRTP55899 365 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 PPP1R8Q12972 351 aaKnown RBP12.67□□□□□ -0.38
USP38-201ENST00000307017 PRR23BQ6ZRT6 265 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 ZNF554Q86TJ5 538 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 NELL1Q92832 810 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 HDAC10Q969S8 669 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 PARPBPQ9NWS1 579 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 ISM1B1AKI9 464 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 PCCBP05166 539 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 MYCLP1P12525 358 aaPredicted RBP12.67□□□□□ -0.38
USP38-201ENST00000307017 POLR2EP19388 210 aaKnown RBP12.67□□□□□ -0.38
USP38-201ENST00000307017 RPL6Q02878 288 aaKnown RBP12.67□□□□□ -0.38
USP38-201ENST00000307017 MPPE1Q53F39 396 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 GPER1Q99527 375 aa12.67□□□□□ -0.38
USP38-201ENST00000307017 DHRS12A0PJE2 317 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 WNT7AO00755 349 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms