RNA–Protein interactions for RNA: ENST00000306329.15

MTCL1-201, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MTCL1, Length 5,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-201ENST00000306329 PLOD3O60568 738 aa20.54■□□□□ 0.88
MTCL1-201ENST00000306329 CELF3Q5SZQ8 465 aaKnown RBP20.54■□□□□ 0.88
MTCL1-201ENST00000306329 LYPLAL1Q5VWZ2 237 aa20.54■□□□□ 0.88
MTCL1-201ENST00000306329 DUPD1Q68J44 220 aa20.54■□□□□ 0.88
MTCL1-201ENST00000306329 ACSS3Q9H6R3 686 aa20.54■□□□□ 0.88
MTCL1-201ENST00000306329 SSR3Q9UNL2 185 aa20.54■□□□□ 0.88
MTCL1-201ENST00000306329 POLR3HQ9Y535 204 aaPredicted RBP20.54■□□□□ 0.88
MTCL1-201ENST00000306329 S100A9P06702 114 aaKnown RBP20.54■□□□□ 0.88
MTCL1-201ENST00000306329 CRELD2Q6UXH1 353 aaPredicted RBP20.54■□□□□ 0.88
MTCL1-201ENST00000306329 CDH19Q9H159 772 aa20.54■□□□□ 0.88
MTCL1-201ENST00000306329 MCUBQ9NWR8 336 aa20.54■□□□□ 0.88
MTCL1-201ENST00000306329 FAM92AA1XBS5 289 aa20.54■□□□□ 0.88
MTCL1-201ENST00000306329 CLK3P49761 638 aaKnown RBP20.54■□□□□ 0.88
MTCL1-201ENST00000306329 ABATP80404 500 aa20.54■□□□□ 0.88
MTCL1-201ENST00000306329 SIX5Q8N196 739 aa20.54■□□□□ 0.88
MTCL1-201ENST00000306329 PNPOQ9NVS9 261 aa20.54■□□□□ 0.88
MTCL1-201ENST00000306329 MANSC4A6NHS7 340 aaPredicted RBP20.53■□□□□ 0.88
MTCL1-201ENST00000306329 PAPSS1O43252 624 aaPredicted RBP20.53■□□□□ 0.88
MTCL1-201ENST00000306329 KRT33AO76009 404 aa20.53■□□□□ 0.88
MTCL1-201ENST00000306329 BBS12Q6ZW61 710 aa20.53■□□□□ 0.88
MTCL1-201ENST00000306329 PHF13Q86YI8 300 aaPredicted RBP20.53■□□□□ 0.88
MTCL1-201ENST00000306329 ADGRG2Q8IZP9 1017 aa20.53■□□□□ 0.88
MTCL1-201ENST00000306329 ANKRD52Q8NB46 1076 aa20.53■□□□□ 0.88
MTCL1-201ENST00000306329 GPC6Q9Y625 555 aaPredicted RBP20.53■□□□□ 0.88
MTCL1-201ENST00000306329 RCCD1A6NED2 376 aa20.53■□□□□ 0.88
MTCL1-201ENST00000306329 PSMD10O75832 226 aa20.53■□□□□ 0.88
MTCL1-201ENST00000306329 OR4A15Q8NGL6 344 aa20.53■□□□□ 0.88
MTCL1-201ENST00000306329 UROC1Q96N76 676 aa20.53■□□□□ 0.88
MTCL1-201ENST00000306329 KCNMB3Q9NPA1 279 aa20.53■□□□□ 0.88
MTCL1-201ENST00000306329 COMMD3-BMI1R4GMX3 469 aa20.53■□□□□ 0.88
MTCL1-201ENST00000306329 OR5F1O95221 314 aa20.53■□□□□ 0.88
MTCL1-201ENST00000306329 PACS1Q6VY07 963 aa20.53■□□□□ 0.88
MTCL1-201ENST00000306329 NETO2Q8NC67 525 aa20.53■□□□□ 0.88
MTCL1-201ENST00000306329 SLC9A3R1O14745 358 aaPredicted RBP20.53■□□□□ 0.88
MTCL1-201ENST00000306329 IDO1P14902 403 aa20.53■□□□□ 0.88
MTCL1-201ENST00000306329 RPL7AP62424 266 aaKnown RBP20.53■□□□□ 0.88
MTCL1-201ENST00000306329 KIAA1324Q6UXG2 1013 aaKnown RBP20.53■□□□□ 0.88
MTCL1-201ENST00000306329 LRRC55Q6ZSA7 311 aa20.53■□□□□ 0.88
MTCL1-201ENST00000306329 ZFPM1Q8IX07 1006 aa20.53■□□□□ 0.88
MTCL1-201ENST00000306329 S100ZQ8WXG8 99 aa20.53■□□□□ 0.88
MTCL1-201ENST00000306329 CLK4Q9HAZ1 481 aaKnown RBP20.53■□□□□ 0.88
MTCL1-201ENST00000306329 FBXO5Q9UKT4 447 aa20.53■□□□□ 0.88
MTCL1-201ENST00000306329 ING4Q9UNL4 249 aa20.53■□□□□ 0.88
MTCL1-201ENST00000306329 NUDT17P0C025 328 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 SLC7A2P52569 658 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 ACLYP53396 1101 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 TMEM161BQ8NDZ6 487 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 AP3S1Q92572 193 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 RERGQ96A58 199 aaPredicted RBP20.52■□□□□ 0.88
MTCL1-201ENST00000306329 SLC39A8Q9C0K1 460 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 CAB39LQ9H9S4 337 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 PRDM8Q9NQV8 689 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 BTNL10A8MVZ5 291 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 GTPBP1O00178 669 aaKnown RBP20.52■□□□□ 0.88
MTCL1-201ENST00000306329 SLC28A2O43868 658 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 LPOP22079 712 aaPredicted RBP20.52■□□□□ 0.88
MTCL1-201ENST00000306329 TRIM40Q6P9F5 258 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 HDAC10Q969S8 669 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 NPAS2Q99743 824 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 CDT1Q9H211 546 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 A0A1W2PPM1 405 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 HMGB3O15347 200 aaKnown RBP20.52■□□□□ 0.88
MTCL1-201ENST00000306329 ETS2P15036 469 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 STARP49675 285 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 ATP6V0D1P61421 351 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 USP4Q13107 963 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 PTCHD4Q6ZW05 846 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 COX4I2Q96KJ9 171 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 CORO1BQ9BR76 489 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 EXO5Q9H790 373 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 SALL3Q9BXA9 1300 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 ISM1B1AKI9 464 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 TP73O15350 636 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 SERPINB7O75635 380 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 PTPN5P54829 565 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 TAS2R40P59535 323 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 NOMO3P69849 1222 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 OLFML2AQ68BL7 652 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 SERPINA13PQ6UXR4 307 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 CCDC185Q8N715 623 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 RAD51AP1Q96B01 352 aa20.52■□□□□ 0.88
MTCL1-201ENST00000306329 TCRBV9S1A1TA0A576 114 aa20.52■□□□□ 0.87
MTCL1-201ENST00000306329 C1QTNF3-AMACRE9PGA6 284 aa20.52■□□□□ 0.87
MTCL1-201ENST00000306329 ERN1O75460 977 aaKnown RBP20.52■□□□□ 0.87
MTCL1-201ENST00000306329 OR4L1Q8NH43 312 aa20.52■□□□□ 0.87
MTCL1-201ENST00000306329 GLIS2Q9BZE0 524 aaPredicted RBP20.52■□□□□ 0.87
MTCL1-201ENST00000306329 ETAA1Q9NY74 926 aa20.52■□□□□ 0.87
MTCL1-201ENST00000306329 SUV39H1O43463 412 aa20.51■□□□□ 0.87
MTCL1-201ENST00000306329 RGS1Q08116 209 aa20.51■□□□□ 0.87
MTCL1-201ENST00000306329 IKBKEQ14164 716 aa20.51■□□□□ 0.87
MTCL1-201ENST00000306329 SDHAF4Q5VUM1 108 aa20.51■□□□□ 0.87
MTCL1-201ENST00000306329 PIH1D2Q8WWB5 315 aa20.51■□□□□ 0.87
MTCL1-201ENST00000306329 ACO2Q99798 780 aaKnown RBP20.51■□□□□ 0.87
MTCL1-201ENST00000306329 LMAN2LQ9H0V9 348 aa20.51■□□□□ 0.87
MTCL1-201ENST00000306329 NRCAMQ92823 1304 aa20.51■□□□□ 0.87
MTCL1-201ENST00000306329 CCDC162PA2VCL2 907 aa20.51■□□□□ 0.87
MTCL1-201ENST00000306329 SRRM3A6NNA2 597 aaPredicted RBP20.51■□□□□ 0.87
MTCL1-201ENST00000306329 SERPINA1P01009 418 aa20.51■□□□□ 0.87
MTCL1-201ENST00000306329 SEMA5AQ13591 1074 aa20.51■□□□□ 0.87
MTCL1-201ENST00000306329 CMC1Q7Z7K0 106 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms