RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 ELF3P78545 371 aaPredicted RBP13.45□□□□□ -0.26
TRIM56-201ENST00000306085 XKR6Q5GH73 641 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 KYAT3Q6YP21 454 aaKnown RBP13.45□□□□□ -0.26
TRIM56-201ENST00000306085 UBE2R2Q712K3 238 aaPredicted RBP13.45□□□□□ -0.26
TRIM56-201ENST00000306085 ZNF227Q86WZ6 799 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 TBC1D21Q8IYX1 336 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 GPSM3Q9Y4H4 160 aa13.45□□□□□ -0.26
TRIM56-201ENST00000306085 RPS6KA4O75676 772 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 IGSF6O95976 241 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 TUFMP49411 452 aaKnown RBP13.44□□□□□ -0.26
TRIM56-201ENST00000306085 SNRPFP62306 86 aaKnown RBP13.44□□□□□ -0.26
TRIM56-201ENST00000306085 MTX3Q5HYI7 312 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 SLC30A6Q6NXT4 461 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 MSL3Q8N5Y2 521 aaKnown RBP13.44□□□□□ -0.26
TRIM56-201ENST00000306085 COQ8BQ96D53 544 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 POP1Q99575 1024 aaKnown RBP13.44□□□□□ -0.26
TRIM56-201ENST00000306085 GPATCH1Q9BRR8 931 aaKnown RBP13.44□□□□□ -0.26
TRIM56-201ENST00000306085 CCNB1IP1Q9NPC3 277 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 NR2C2P49116 596 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 LIPEQ05469 1076 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 VMACQ2NL98 169 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 C16orf59Q7L2K0 433 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 SPATA20Q8TB22 786 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 PARK7Q99497 189 aaKnown RBP13.44□□□□□ -0.26
TRIM56-201ENST00000306085 ALKBH4Q9NXW9 302 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 TNPO3Q9Y5L0 923 aaKnown RBP13.44□□□□□ -0.26
TRIM56-201ENST00000306085 DDX3YO15523 660 aaKnown RBP13.44□□□□□ -0.26
TRIM56-201ENST00000306085 IPO13O94829 963 aaKnown RBP13.44□□□□□ -0.26
TRIM56-201ENST00000306085 GALNT6Q8NCL4 622 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 KCNK4Q9NYG8 393 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 PSMA1P25786 263 aaKnown RBP13.44□□□□□ -0.26
TRIM56-201ENST00000306085 CDK9P50750 372 aaKnown RBP13.44□□□□□ -0.26
TRIM56-201ENST00000306085 SLC25A3Q00325 362 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 SYNE4Q8N205 404 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 CD300LFQ8TDQ1 290 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 MTF2Q9Y483 593 aaPredicted RBP13.44□□□□□ -0.26
TRIM56-201ENST00000306085 HEATR1Q9H583 2144 aaKnown RBP13.44□□□□□ -0.26
TRIM56-201ENST00000306085 FDPSP14324 419 aaKnown RBP13.44□□□□□ -0.26
TRIM56-201ENST00000306085 ANPEPP15144 967 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 APTXQ7Z2E3 356 aaKnown RBP13.44□□□□□ -0.26
TRIM56-201ENST00000306085 PLCZ1Q86YW0 608 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 LNX2Q8N448 690 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 FBXO25Q8TCJ0 367 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 RIIAD1A6NNX1 92 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 E2F3O00716 465 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 POLR2EP19388 210 aaKnown RBP13.44□□□□□ -0.26
TRIM56-201ENST00000306085 TBX4P57082 545 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 VLDLRP98155 873 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 B3GNT4Q9C0J1 378 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 MYH14Q7Z406 1995 aaKnown RBP13.44□□□□□ -0.26
TRIM56-201ENST00000306085 ATP6V1G1O75348 118 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 RPL38P63173 70 aaKnown RBP13.44□□□□□ -0.26
TRIM56-201ENST00000306085 PHC1P78364 1004 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 CGRRF1Q99675 332 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 ZNF225Q9UK10 706 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 MXD1Q05195 221 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 ATP13A4Q4VNC1 1196 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 PACSIN3Q9UKS6 424 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 EDARQ9UNE0 448 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 SLC12A3P55017 1021 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 FBXL19Q6PCT2 694 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 LPIN3Q9BQK8 851 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 SMPD4Q9NXE4 827 aa13.44□□□□□ -0.26
TRIM56-201ENST00000306085 PLEKHG2Q9H7P9 1386 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 FAM205CA6NFA0 338 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 RLN2P04090 185 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 HSD17B2P37059 387 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 MB21D2Q8IYB1 491 aaPredicted RBP13.43□□□□□ -0.26
TRIM56-201ENST00000306085 ADAM32Q8TC27 787 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 JSRP1Q96MG2 331 aaPredicted RBP13.43□□□□□ -0.26
TRIM56-201ENST00000306085 PANX1Q96RD7 426 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 PFDN5Q99471 154 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 PCDH9Q9HC56 1237 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 PCDHB12Q9Y5F1 795 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 ERVV-1B6SEH8 477 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 IFNA7P01567 189 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 DGKAP23743 735 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 MTHFRP42898 656 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 TKTL1P51854 596 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 POLR2LP62875 67 aaKnown RBP13.43□□□□□ -0.26
TRIM56-201ENST00000306085 SNAPC1Q16533 368 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 ZNF627Q7L945 461 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 RNF180Q86T96 592 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 EVA1BQ9NVM1 165 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 MOCS1Q9NZB8 636 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 SYNMO15061 1565 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 SMAD9O15198 467 aaKnown RBP13.43□□□□□ -0.26
TRIM56-201ENST00000306085 MATN4O95460 622 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 ZNF14P17017 642 aaPredicted RBP13.43□□□□□ -0.26
TRIM56-201ENST00000306085 LACTB2Q53H82 288 aaPredicted RBP13.43□□□□□ -0.26
TRIM56-201ENST00000306085 PPM1LQ5SGD2 360 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 CSGALNACT1Q8TDX6 532 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 SNX33Q8WV41 574 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 OR52E6Q96RD3 313 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 BCKDKO14874 412 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 HSPA14Q0VDF9 509 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 PHC2Q8IXK0 858 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 FUT8Q9BYC5 575 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 CLASP1Q7Z460 1538 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 LINC00032P0C843 101 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms