RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 FOXD4Q12950 439 aaPredicted RBP13.09□□□□□ -0.31
TRIM35-201ENST00000305364 PACRGLQ8N7B6 248 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 POC5Q8NA72 575 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 TFAP2CQ92754 450 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 BCO2Q9BYV7 579 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 RHOBTB2Q9BYZ6 727 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 SCN3BQ9NY72 215 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 CCDC154A6NI56 674 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 ACOT8O14734 319 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 RSL1D1O76021 490 aaKnown RBP13.09□□□□□ -0.31
TRIM35-201ENST00000305364 FUCA1P04066 466 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 GSNP06396 782 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 LBPP18428 481 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 SOWAHAQ2M3V2 549 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 TTC23Q5W5X9 447 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 TRNP1Q6NT89 227 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 ZC3HC1Q86WB0 502 aaKnown RBP13.09□□□□□ -0.31
TRIM35-201ENST00000305364 FBXO30Q8TB52 745 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 C19orf60Q96EN9 201 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 NPLQ9BXD5 320 aaPredicted RBP13.09□□□□□ -0.31
TRIM35-201ENST00000305364 FTHL17Q9BXU8 183 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 NPHS1O60500 1241 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 MYO1DO94832 1006 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 SNAP29O95721 258 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 LINC00032P0C843 101 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 TXNP10599 105 aaKnown RBP13.09□□□□□ -0.31
TRIM35-201ENST00000305364 YBX3P16989 372 aaKnown RBP eCLIP13.09□□□□□ -0.31
TRIM35-201ENST00000305364 ELK4P28324 431 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 MATKP42679 507 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 PTPN9P43378 593 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 NUMBP49757 651 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 SCIMPQ6UWF3 145 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 OTOP3Q7RTS5 596 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 SLC7A5P1Q8MH63 180 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 PDPRQ8NCN5 879 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 OR52K2Q8NGK3 314 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 OTUD5Q96G74 571 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 PPP1R10Q96QC0 940 aaKnown RBP13.09□□□□□ -0.31
TRIM35-201ENST00000305364 ZBTB18Q99592 522 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 HERC2P3Q9BVR0 1158 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 C6orf62Q9GZU0 229 aaPredicted RBP13.09□□□□□ -0.31
TRIM35-201ENST00000305364 TUT1Q9H6E5 874 aaKnown RBP13.09□□□□□ -0.31
TRIM35-201ENST00000305364 KLK14Q9P0G3 267 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 CRYL1Q9Y2S2 319 aa13.09□□□□□ -0.31
TRIM35-201ENST00000305364 MYO1GB0I1T2 1018 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 PFDN6O15212 129 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 HBP1O60381 514 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 AHSGP02765 367 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 SEPHS1P49903 392 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 KYAT1Q16773 422 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 PFKFB4Q16877 469 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 ATP6AP1LQ52LC2 224 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 ESRP1Q6NXG1 681 aaKnown RBP13.08□□□□□ -0.32
TRIM35-201ENST00000305364 CNSTQ6PJW8 725 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 SPESP1Q6UW49 350 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 METTL7BQ6UX53 244 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 ARMCX6Q7L4S7 300 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 TAS2R42Q7RTR8 314 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 THAP5Q7Z6K1 395 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 STYXQ8WUJ0 223 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 TBL1YQ9BQ87 522 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 NIFKQ9BYG3 293 aaKnown RBP13.08□□□□□ -0.32
TRIM35-201ENST00000305364 SACM1LQ9NTJ5 587 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 AQP12BA6NM10 295 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 SERPINB7O75635 380 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 PROZP22891 400 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 MAPRE1Q15691 268 aaKnown RBP13.08□□□□□ -0.32
TRIM35-201ENST00000305364 PIGZQ86VD9 579 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 AQP12AQ8IXF9 295 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 CPSF7Q8N684 471 aaKnown RBP13.08□□□□□ -0.32
TRIM35-201ENST00000305364 ACVR1CQ8NER5 493 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 SPATA22Q8NHS9 363 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 TRUB1Q8WWH5 349 aaKnown RBP13.08□□□□□ -0.32
TRIM35-201ENST00000305364 S100ZQ8WXG8 99 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 EDEM1Q92611 657 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 ASPSCR1Q9BZE9 553 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 SARS2Q9NP81 518 aaKnown RBP13.08□□□□□ -0.32
TRIM35-201ENST00000305364 TMEM9Q9P0T7 183 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 LIMD1Q9UGP4 676 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 TMEM221A6NGB7 291 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 ATG7O95352 703 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 TRIM32Q13049 653 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 GTF2H3Q13889 308 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 IQSEC1Q6DN90 963 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 FAM83AQ86UY5 434 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 PTGR2Q8N8N7 351 aaPredicted RBP13.08□□□□□ -0.32
TRIM35-201ENST00000305364 GPR22Q99680 433 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 ALG2Q9H553 416 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 VPS51Q9UID3 782 aa13.08□□□□□ -0.32
TRIM35-201ENST00000305364 DPYSL4O14531 572 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 ARPC2O15144 300 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 SYNCRIPO60506 623 aaKnown RBP13.07□□□□□ -0.32
TRIM35-201ENST00000305364 OXSR1O95747 527 aaPredicted RBP13.07□□□□□ -0.32
TRIM35-201ENST00000305364 GSRP00390 522 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 GPIP06744 558 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 IDO1P14902 403 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 TKTL1P51854 596 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 GEMP55040 296 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 ADAM17P78536 824 aa13.07□□□□□ -0.32
TRIM35-201ENST00000305364 LIPEQ05469 1076 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms