RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 RNF157Q96PX1 679 aa26.56■■□□□ 1.84
CDKN2A-201ENST00000304494 SLC13A1Q9BZW2 595 aa26.56■■□□□ 1.84
CDKN2A-201ENST00000304494 APOBEC3BQ9UH17 382 aaKnown RBP26.56■■□□□ 1.84
CDKN2A-201ENST00000304494 ZMIZ1Q9ULJ6 1067 aa26.56■■□□□ 1.84
CDKN2A-201ENST00000304494 PHTF1Q9UMS5 762 aa26.56■■□□□ 1.84
CDKN2A-201ENST00000304494 ANKRD36A6QL64 1941 aa26.56■■□□□ 1.84
CDKN2A-201ENST00000304494 EPG5Q9HCE0 2579 aa26.55■■□□□ 1.84
CDKN2A-201ENST00000304494 MAP1BP46821 2468 aaKnown RBP26.55■■□□□ 1.84
CDKN2A-201ENST00000304494 K7ESM1 405 aa26.55■■□□□ 1.84
CDKN2A-201ENST00000304494 NEBLO76041 1014 aa26.55■■□□□ 1.84
CDKN2A-201ENST00000304494 RECQL5O94762 991 aaPredicted RBP26.55■■□□□ 1.84
CDKN2A-201ENST00000304494 CES1P23141 567 aa26.55■■□□□ 1.84
CDKN2A-201ENST00000304494 PPARDQ03181 441 aa26.55■■□□□ 1.84
CDKN2A-201ENST00000304494 GBE1Q04446 702 aa26.55■■□□□ 1.84
CDKN2A-201ENST00000304494 ITKQ08881 620 aa26.55■■□□□ 1.84
CDKN2A-201ENST00000304494 INPP5AQ14642 412 aa26.55■■□□□ 1.84
CDKN2A-201ENST00000304494 CCDC170Q8IYT3 715 aa26.55■■□□□ 1.84
CDKN2A-201ENST00000304494 PHACTR4Q8IZ21 702 aa26.55■■□□□ 1.84
CDKN2A-201ENST00000304494 FAM181AQ8N9Y4 354 aa26.55■■□□□ 1.84
CDKN2A-201ENST00000304494 ATL2Q8NHH9 583 aa26.55■■□□□ 1.84
CDKN2A-201ENST00000304494 TRAF3IP1Q8TDR0 691 aaPredicted RBP26.55■■□□□ 1.84
CDKN2A-201ENST00000304494 LMX1AQ8TE12 382 aa26.55■■□□□ 1.84
CDKN2A-201ENST00000304494 APOOQ9BUR5 198 aa26.55■■□□□ 1.84
CDKN2A-201ENST00000304494 USP29Q9HBJ7 922 aa26.55■■□□□ 1.84
CDKN2A-201ENST00000304494 NCKIPSDQ9NZQ3 722 aa26.55■■□□□ 1.84
CDKN2A-201ENST00000304494 B4GALT6Q9UBX8 382 aa26.55■■□□□ 1.84
CDKN2A-201ENST00000304494 PTPRBP23467 1997 aa26.55■■□□□ 1.84
CDKN2A-201ENST00000304494 MAP3K6O95382 1288 aa26.54■■□□□ 1.84
CDKN2A-201ENST00000304494 PCCBP05166 539 aa26.54■■□□□ 1.84
CDKN2A-201ENST00000304494 CKMT1AP12532 417 aa26.54■■□□□ 1.84
CDKN2A-201ENST00000304494 MAGEA1P43355 309 aa26.54■■□□□ 1.84
CDKN2A-201ENST00000304494 BLKP51451 505 aa26.54■■□□□ 1.84
CDKN2A-201ENST00000304494 TRAF2Q12933 501 aa26.54■■□□□ 1.84
CDKN2A-201ENST00000304494 NFATC4Q14934 902 aa26.54■■□□□ 1.84
CDKN2A-201ENST00000304494 ARMC12Q5T9G4 340 aa26.54■■□□□ 1.84
CDKN2A-201ENST00000304494 FAXCQ5TGI0 409 aa26.54■■□□□ 1.84
CDKN2A-201ENST00000304494 ZCCHC8Q6NZY4 707 aaKnown RBP26.54■■□□□ 1.84
CDKN2A-201ENST00000304494 RHOT1Q8IXI2 618 aa26.54■■□□□ 1.84
CDKN2A-201ENST00000304494 HDAC11Q96DB2 347 aa26.54■■□□□ 1.84
CDKN2A-201ENST00000304494 MRFAP1L1Q96HT8 127 aa26.54■■□□□ 1.84
CDKN2A-201ENST00000304494 SEMA3CQ99985 751 aa26.54■■□□□ 1.84
CDKN2A-201ENST00000304494 MAK16Q9BXY0 300 aaKnown RBP26.54■■□□□ 1.84
CDKN2A-201ENST00000304494 CAAP1Q9H8G2 361 aa26.54■■□□□ 1.84
CDKN2A-201ENST00000304494 LUC7LQ9NQ29 371 aaKnown RBP26.54■■□□□ 1.84
CDKN2A-201ENST00000304494 DDX56Q9NY93 547 aaKnown RBP26.54■■□□□ 1.84
CDKN2A-201ENST00000304494 DTLQ9NZJ0 730 aa26.54■■□□□ 1.84
CDKN2A-201ENST00000304494 A8MX80 341 aa26.53■■□□□ 1.84
CDKN2A-201ENST00000304494 TPP1O14773 563 aa26.53■■□□□ 1.84
CDKN2A-201ENST00000304494 PGLSO95336 258 aa26.53■■□□□ 1.84
CDKN2A-201ENST00000304494 LCA5LO95447 670 aa26.53■■□□□ 1.84
CDKN2A-201ENST00000304494 CYP2A6P11509 494 aaPredicted RBP26.53■■□□□ 1.84
CDKN2A-201ENST00000304494 KRT10P13645 584 aa26.53■■□□□ 1.84
CDKN2A-201ENST00000304494 CCNB1P14635 433 aa26.53■■□□□ 1.84
CDKN2A-201ENST00000304494 VIPR1P32241 457 aa26.53■■□□□ 1.84
CDKN2A-201ENST00000304494 DUSP3P51452 185 aaPredicted RBP26.53■■□□□ 1.84
CDKN2A-201ENST00000304494 ZNF75DP51815 510 aa26.53■■□□□ 1.84
CDKN2A-201ENST00000304494 E2F1Q01094 437 aa26.53■■□□□ 1.84
CDKN2A-201ENST00000304494 ALG1LQ6GMV1 187 aa26.53■■□□□ 1.84
CDKN2A-201ENST00000304494 NDUFAF2Q8N183 169 aa26.53■■□□□ 1.84
CDKN2A-201ENST00000304494 CCNYQ8ND76 341 aa26.53■■□□□ 1.84
CDKN2A-201ENST00000304494 APOLD1Q96LR9 279 aa26.53■■□□□ 1.84
CDKN2A-201ENST00000304494 RBSNQ9H1K0 784 aa26.53■■□□□ 1.84
CDKN2A-201ENST00000304494 RBM22Q9NW64 420 aaKnown RBP eCLIP26.53■■□□□ 1.84
CDKN2A-201ENST00000304494 KCTD5Q9NXV2 234 aa26.53■■□□□ 1.84
CDKN2A-201ENST00000304494 SPOPO43791 374 aa26.52■■□□□ 1.84
CDKN2A-201ENST00000304494 KRT1P04264 644 aa26.52■■□□□ 1.84
CDKN2A-201ENST00000304494 JUPP14923 745 aa26.52■■□□□ 1.84
CDKN2A-201ENST00000304494 HADHBP55084 474 aaKnown RBP26.52■■□□□ 1.84
CDKN2A-201ENST00000304494 ACOX1Q15067 660 aa26.52■■□□□ 1.84
CDKN2A-201ENST00000304494 SPA17Q15506 151 aa26.52■■□□□ 1.84
CDKN2A-201ENST00000304494 PRRT3Q5FWE3 981 aa26.52■■□□□ 1.84
CDKN2A-201ENST00000304494 USP45Q70EL2 814 aa26.52■■□□□ 1.84
CDKN2A-201ENST00000304494 CCDC13Q8IYE1 715 aa26.52■■□□□ 1.84
CDKN2A-201ENST00000304494 RBFAQ8N0V3 343 aa26.52■■□□□ 1.84
CDKN2A-201ENST00000304494 SCRN2Q96FV2 425 aa26.52■■□□□ 1.84
CDKN2A-201ENST00000304494 IL12RB2Q99665 862 aa26.52■■□□□ 1.84
CDKN2A-201ENST00000304494 TTLL3Q9Y4R7 772 aa26.52■■□□□ 1.84
CDKN2A-201ENST00000304494 OR1A2Q9Y585 309 aa26.52■■□□□ 1.84
CDKN2A-201ENST00000304494 RAI2Q9Y5P3 530 aa26.52■■□□□ 1.84
CDKN2A-201ENST00000304494 FAM149AA5PLN7 773 aa26.51■■□□□ 1.83
CDKN2A-201ENST00000304494 C3orf70A6NLC5 250 aaPredicted RBP26.51■■□□□ 1.83
CDKN2A-201ENST00000304494 APOL1O14791 398 aa26.51■■□□□ 1.83
CDKN2A-201ENST00000304494 ZFXP17010 805 aaPredicted RBP26.51■■□□□ 1.83
CDKN2A-201ENST00000304494 CA4P22748 312 aa26.51■■□□□ 1.83
CDKN2A-201ENST00000304494 CYLC1P35663 651 aaPredicted RBP26.51■■□□□ 1.83
CDKN2A-201ENST00000304494 NOP2P46087 812 aaKnown RBP26.51■■□□□ 1.83
CDKN2A-201ENST00000304494 SLC10A2Q12908 348 aaPredicted RBP26.51■■□□□ 1.83
CDKN2A-201ENST00000304494 SLC9A4Q6AI14 798 aa26.51■■□□□ 1.83
CDKN2A-201ENST00000304494 ENPP7Q6UWV6 458 aa26.51■■□□□ 1.83
CDKN2A-201ENST00000304494 PLD5Q8N7P1 536 aa26.51■■□□□ 1.83
CDKN2A-201ENST00000304494 TPCN2Q8NHX9 752 aa26.51■■□□□ 1.83
CDKN2A-201ENST00000304494 COQ10AQ96MF6 247 aa26.51■■□□□ 1.83
CDKN2A-201ENST00000304494 PANX2Q96RD6 677 aa26.51■■□□□ 1.83
CDKN2A-201ENST00000304494 LRRC61Q9BV99 259 aa26.51■■□□□ 1.83
CDKN2A-201ENST00000304494 TCEAL2Q9H3H9 227 aaPredicted RBP26.51■■□□□ 1.83
CDKN2A-201ENST00000304494 CCDC86Q9H6F5 360 aaKnown RBP26.51■■□□□ 1.83
CDKN2A-201ENST00000304494 SALL4Q9UJQ4 1053 aa26.51■■□□□ 1.83
CDKN2A-201ENST00000304494 PNMA8BQ9ULN7 279 aaPredicted RBP26.51■■□□□ 1.83
CDKN2A-201ENST00000304494 HEY1Q9Y5J3 304 aa26.51■■□□□ 1.83
CDKN2A-201ENST00000304494 LRRK1Q38SD2 2015 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms