RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 POU4F1Q01851 419 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 LMAN2Q12907 356 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 USP4Q13107 963 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 GPM6BQ13491 265 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 DMC1Q14565 340 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 TAF1AQ15573 450 aaPredicted RBP12.06□□□□□ -0.48
TPM3-202ENST00000302206 TAF1BQ53T94 588 aaPredicted RBP12.06□□□□□ -0.48
TPM3-202ENST00000302206 ZNF470Q6ECI4 717 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 CCDC121Q6ZUS5 278 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 SRLQ86TD4 932 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 DENND6AQ8IWF6 608 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 OTUD6BQ8N6M0 293 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 RDH11Q8TC12 318 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 WFDC5Q8TCV5 224 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 CCT6BQ92526 530 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 HLA-CQ95604 372 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 E2F7Q96AV8 911 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 TCEAL4Q96EI5 215 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 TSPAN17Q96FV3 270 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 NSMCE3Q96MG7 304 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 C7orf26Q96N11 449 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 SLCO1B3Q9NPD5 702 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 ABCB8Q9NUT2 735 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 TDP1Q9NUW8 608 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 NLE1Q9NVX2 485 aaPredicted RBP12.06□□□□□ -0.48
TPM3-202ENST00000302206 TLK1Q9UKI8 766 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 RRP15Q9Y3B9 282 aaKnown RBP12.06□□□□□ -0.48
TPM3-202ENST00000302206 ACTL7AQ9Y615 435 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 MTCH2Q9Y6C9 303 aa12.06□□□□□ -0.48
TPM3-202ENST00000302206 A0A087X1B8 175 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 FAM95CA0A1B0GW59 222 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 CCDC78A2IDD5 438 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 PRR33A8MZF0 331 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 GOLGA8TH3BQL2 631 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 SLC9A3R1O14745 358 aaPredicted RBP12.05□□□□□ -0.48
TPM3-202ENST00000302206 FZD6O60353 706 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 SNNO75324 88 aaPredicted RBP12.05□□□□□ -0.48
TPM3-202ENST00000302206 PRKCGP05129 697 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 OGNP20774 298 aaKnown RBP12.05□□□□□ -0.48
TPM3-202ENST00000302206 ZNF140P52738 457 aaPredicted RBP12.05□□□□□ -0.48
TPM3-202ENST00000302206 PRKAA2P54646 552 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 CORO7P57737 925 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 RAB10P61026 200 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 PRAMEP78395 509 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 MPP1Q00013 466 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 CCDC15Q0P6D6 951 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 CTBP1Q13363 440 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 GALNT3Q14435 633 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 USP10Q14694 798 aaKnown RBP12.05□□□□□ -0.48
TPM3-202ENST00000302206 ZNF77Q15935 545 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 TSNAXIP1Q2TAA8 658 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 PLEKHG6Q3KR16 790 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 PPM1JQ5JR12 505 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 LINGO4Q6UY18 593 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 TRPM8Q7Z2W7 1104 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 CMC1Q7Z7K0 106 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 CILP2Q8IUL8 1156 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 APCDD1Q8J025 514 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 GBP7Q8N8V2 638 aaPredicted RBP12.05□□□□□ -0.48
TPM3-202ENST00000302206 CCDC63Q8NA47 563 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 BLOC1S5Q8TDH9 187 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 HDAC10Q969S8 669 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 ISG20Q96AZ6 181 aaKnown RBP12.05□□□□□ -0.48
TPM3-202ENST00000302206 ZNF707Q96C28 371 aaPredicted RBP12.05□□□□□ -0.48
TPM3-202ENST00000302206 TSNARE1Q96NA8 513 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 SLC2A11Q9BYW1 496 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 ACTR5Q9H9F9 607 aaPredicted RBP12.05□□□□□ -0.48
TPM3-202ENST00000302206 MARK1Q9P0L2 795 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 TMEM216Q9P0N5 145 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 SLC39A10Q9ULF5 831 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 CHKBQ9Y259 395 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 USH1CQ9Y6N9 552 aa12.05□□□□□ -0.48
TPM3-202ENST00000302206 C2orf81A6NN90 581 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 ANKRD66B4E2M5 251 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 SCAMP3O14828 347 aaKnown RBP12.04□□□□□ -0.48
TPM3-202ENST00000302206 SOCS5O75159 536 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 H2AFYO75367 372 aaKnown RBP12.04□□□□□ -0.48
TPM3-202ENST00000302206 GLP2RO95838 553 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 CA3P07451 260 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 STMN1P16949 149 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 GRK2P25098 689 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 ALDH3A1P30838 453 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 GRIA4P48058 902 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 ARSDP51689 593 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 KPNA2P52292 529 aaKnown RBP12.04□□□□□ -0.48
TPM3-202ENST00000302206 TMPRSS15P98073 1019 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 SULT2A1Q06520 285 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 TRAF2Q12933 501 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 SMAD1Q15797 465 aaKnown RBP12.04□□□□□ -0.48
TPM3-202ENST00000302206 SLC5A9Q2M3M2 681 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 FASTKD1Q53R41 847 aaKnown RBP12.04□□□□□ -0.48
TPM3-202ENST00000302206 SPDYAQ5MJ70 313 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 MBLAC2Q68D91 279 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 MRNIPQ6NTE8 343 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 OR6P1Q8NGX9 317 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 SREK1Q8WXA9 508 aaKnown RBP12.04□□□□□ -0.48
TPM3-202ENST00000302206 IRF7Q92985 503 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 RMDN1Q96DB5 314 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 ATXN7L3BQ96GX2 97 aa12.04□□□□□ -0.48
TPM3-202ENST00000302206 TCF12Q99081 682 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms