RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 MATKP42679 507 aa14.73□□□□□ -0.05
COL6A2-201ENST00000300527 CHRNA4P43681 627 aa14.73□□□□□ -0.05
COL6A2-201ENST00000300527 OCA2Q04671 838 aa14.73□□□□□ -0.05
COL6A2-201ENST00000300527 CDH17Q12864 832 aa14.73□□□□□ -0.05
COL6A2-201ENST00000300527 TRAP1Q12931 704 aaKnown RBP14.73□□□□□ -0.05
COL6A2-201ENST00000300527 METTL7BQ6UX53 244 aa14.73□□□□□ -0.05
COL6A2-201ENST00000300527 TMEM74Q96NL1 305 aa14.73□□□□□ -0.05
COL6A2-201ENST00000300527 R3HDMLQ9H3Y0 253 aa14.73□□□□□ -0.05
COL6A2-201ENST00000300527 CASS4Q9NQ75 786 aa14.73□□□□□ -0.05
COL6A2-201ENST00000300527 GJA3Q9Y6H8 435 aa14.73□□□□□ -0.05
COL6A2-201ENST00000300527 USP3Q9Y6I4 520 aa14.73□□□□□ -0.05
COL6A2-201ENST00000300527 LTBP1Q14766 1721 aa14.73□□□□□ -0.05
COL6A2-201ENST00000300527 A8MT66 165 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 ARPC2O15144 300 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 MAGP20916 626 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 RCVRNP35243 200 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 CAPGP40121 348 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 PCYT1AP49585 367 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 FRG1Q14331 258 aaKnown RBP14.72□□□□□ -0.05
COL6A2-201ENST00000300527 PDZD4Q76G19 769 aaPredicted RBP14.72□□□□□ -0.05
COL6A2-201ENST00000300527 OR6P1Q8NGX9 317 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 GMLQ99445 158 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 RAD21L1Q9H4I0 556 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 GOLGA2P5Q9HBQ8 144 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 EML4Q9HC35 981 aaKnown RBP14.72□□□□□ -0.05
COL6A2-201ENST00000300527 TMEM181Q9P2C4 612 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 CD300AQ9UGN4 299 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 NUP205Q92621 2012 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 H0YJX3 145 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 CYP2B6P20813 491 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 AKAP5P24588 427 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 IL1RL1Q01638 556 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 TNFAIP2Q03169 654 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 CXCL9Q07325 125 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 NFYCQ13952 458 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 PRR23BQ6ZRT6 265 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 STK32CQ86UX6 486 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 REPS2Q8NFH8 660 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 OR52K2Q8NGK3 314 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 CENPNQ96H22 339 aaPredicted RBP14.72□□□□□ -0.05
COL6A2-201ENST00000300527 KCNA7Q96RP8 456 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 EPS8L2Q9H6S3 715 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 CCM2LQ9NUG4 571 aaPredicted RBP14.72□□□□□ -0.05
COL6A2-201ENST00000300527 DDIT4Q9NX09 232 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 CNOT3O75175 753 aaKnown RBP14.72□□□□□ -0.05
COL6A2-201ENST00000300527 SIX3O95343 332 aaPredicted RBP14.72□□□□□ -0.05
COL6A2-201ENST00000300527 LINC00032P0C843 101 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 MTA1Q13330 715 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 NIPAL1Q6NVV3 410 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 SMG8Q8ND04 991 aaKnown RBP14.72□□□□□ -0.05
COL6A2-201ENST00000300527 EMID1Q96A84 441 aaPredicted RBP14.72□□□□□ -0.05
COL6A2-201ENST00000300527 NRBF2Q96F24 287 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 MRPL57Q9BQC6 102 aaKnown RBP14.72□□□□□ -0.05
COL6A2-201ENST00000300527 BRD8Q9H0E9 1235 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 FAM49AQ9H0Q0 323 aaPredicted RBP14.72□□□□□ -0.05
COL6A2-201ENST00000300527 ASB7Q9H672 318 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 ZNF229Q9UJW7 825 aa14.72□□□□□ -0.05
COL6A2-201ENST00000300527 GPC6Q9Y625 555 aaPredicted RBP14.72□□□□□ -0.05
COL6A2-201ENST00000300527 ZBTB42B2RXF5 422 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 PARNO95453 639 aaKnown RBP14.71□□□□□ -0.05
COL6A2-201ENST00000300527 CPB1P15086 417 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 CD151P48509 253 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 GRB7Q14451 532 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 SLC36A3Q495N2 470 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 ARHGAP36Q6ZRI8 547 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 PELI3Q8N2H9 469 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 SNX19Q92543 992 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 ISL2Q96A47 359 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 HNRNPABQ99729 332 aaKnown RBP14.71□□□□□ -0.05
COL6A2-201ENST00000300527 C1orf50Q9BV19 199 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 DNAI2Q9GZS0 605 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 AKTIPQ9H8T0 292 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 NDUFAF1Q9Y375 327 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 KPNA6O60684 536 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 TOMM70O94826 608 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 LDLRP01130 860 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 ALDOCP09972 364 aaKnown RBP14.71□□□□□ -0.05
COL6A2-201ENST00000300527 ZNF24P17028 368 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 CAPN3P20807 821 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 CREB5Q02930 508 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 SLC25A52Q3SY17 297 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 ZNF362Q5T0B9 420 aaPredicted RBP14.71□□□□□ -0.05
COL6A2-201ENST00000300527 NAPEPLDQ6IQ20 393 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 RALGPS2Q86X27 583 aaPredicted RBP14.71□□□□□ -0.05
COL6A2-201ENST00000300527 FUNDC1Q8IVP5 155 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 ZMAT2Q96NC0 199 aaKnown RBP14.71□□□□□ -0.05
COL6A2-201ENST00000300527 FSD1LQ9BXM9 530 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 LHPPQ9H008 270 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 PLEKHA5Q9HAU0 1116 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 MID1IP1Q9NPA3 183 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 ATAD3AQ9NVI7 634 aa14.71□□□□□ -0.05
COL6A2-201ENST00000300527 IPO13O94829 963 aaKnown RBP14.71□□□□□ -0.06
COL6A2-201ENST00000300527 TXNP10599 105 aaKnown RBP14.71□□□□□ -0.06
COL6A2-201ENST00000300527 INSRRP14616 1297 aa14.71□□□□□ -0.06
COL6A2-201ENST00000300527 DCKP27707 260 aa14.71□□□□□ -0.06
COL6A2-201ENST00000300527 NPY2RP49146 381 aa14.71□□□□□ -0.06
COL6A2-201ENST00000300527 NKX2-5P52952 324 aaPredicted RBP14.71□□□□□ -0.06
COL6A2-201ENST00000300527 ECT2LQ008S8 904 aa14.71□□□□□ -0.06
COL6A2-201ENST00000300527 ITKQ08881 620 aa14.71□□□□□ -0.06
COL6A2-201ENST00000300527 UGP2Q16851 508 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms