RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 PAGE2BQ5JRK9 111 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 SCIMPQ6UWF3 145 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 MAMDC4Q6UXC1 1216 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 SAMD7Q7Z3H4 446 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 PIWIL3Q7Z3Z3 882 aaKnown RBP11.45□□□□□ -0.58
TRUB1-201ENST00000298746 LDB1Q86U70 411 aaPredicted RBP11.45□□□□□ -0.58
TRUB1-201ENST00000298746 BEST2Q8NFU1 509 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 OR52K2Q8NGK3 314 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 EDEM1Q92611 657 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 ACDQ96AP0 544 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 VPS33AQ96AX1 596 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 MUS81Q96NY9 551 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 EIF2AQ9BY44 585 aaKnown RBP11.45□□□□□ -0.58
TRUB1-201ENST00000298746 CCM2LQ9NUG4 571 aaPredicted RBP11.45□□□□□ -0.58
TRUB1-201ENST00000298746 SNTG2Q9NY99 539 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 NME4O00746 187 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 CLPXO76031 633 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 IQCF3P0C7M6 154 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 FCGR1AP12314 374 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 HGFP14210 728 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 MAGP20916 626 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 MATN1P21941 496 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 SERPINB1P30740 379 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 ACADSBP45954 432 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 TPTEP56180 551 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 RAB15P59190 212 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 MBTD1Q05BQ5 628 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 SLC25A52Q3SY17 297 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 RABL3Q5HYI8 236 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 CCNYL2Q5T2Q4 361 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 SYPL2Q5VXT5 272 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 DCAF15Q66K64 600 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 NEPROQ6NW34 567 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 TAF2Q6P1X5 1199 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 IGFN1Q86VF2 1251 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 C18orf25Q96B23 403 aaPredicted RBP11.45□□□□□ -0.58
TRUB1-201ENST00000298746 HNRNPABQ99729 332 aaKnown RBP11.45□□□□□ -0.58
TRUB1-201ENST00000298746 BDH2Q9BUT1 245 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 SPON1Q9HCB6 807 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 SLC2A6Q9UGQ3 507 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 ITGB1BP2Q9UKP3 347 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 BAG5Q9UL15 447 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 RAD54BQ9Y620 910 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 KRBA1A5PL33 1030 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 CLDN25C9JDP6 229 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 FAM72CH0Y354 149 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 ARPC2O15144 300 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 GSTA4O15217 222 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 GAS2O43903 313 aaKnown RBP11.45□□□□□ -0.58
TRUB1-201ENST00000298746 NPHS1O60500 1241 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 SYNCRIPO60506 623 aaKnown RBP11.45□□□□□ -0.58
TRUB1-201ENST00000298746 DEAF1O75398 565 aaPredicted RBP11.45□□□□□ -0.58
TRUB1-201ENST00000298746 OXSR1O95747 527 aaPredicted RBP11.45□□□□□ -0.58
TRUB1-201ENST00000298746 LINC00032P0C843 101 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 IL7RP16871 459 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 YBX3P16989 372 aaKnown RBP eCLIP11.45□□□□□ -0.58
TRUB1-201ENST00000298746 KCNA5P22460 613 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 PFKPQ01813 784 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 GHRHRQ02643 423 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 PPP1R8Q12972 351 aaKnown RBP11.45□□□□□ -0.58
TRUB1-201ENST00000298746 RBM20Q5T481 1227 aaKnown RBP11.45□□□□□ -0.58
TRUB1-201ENST00000298746 FAM72AQ5TYM5 149 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 FAM72DQ6L9T8 149 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 STRADAQ7RTN6 431 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 LINC00523Q86TU6 105 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 SLCO6A1Q86UG4 719 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 FAM72BQ86X60 149 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 CAPSLQ8WWF8 208 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 CCDC126Q96EE4 140 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 C19orf60Q96EN9 201 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 NEURL2Q9BR09 285 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 SPATA7Q9P0W8 599 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 PSME2Q9UL46 239 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 FNDC3AQ9Y2H6 1198 aaKnown RBP11.45□□□□□ -0.58
TRUB1-201ENST00000298746 SLC27A5Q9Y2P5 690 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 CRYL1Q9Y2S2 319 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 SCN9AQ15858 1988 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 SIPA1L1O43166 1804 aa11.45□□□□□ -0.58
TRUB1-201ENST00000298746 COL16A1Q07092 1604 aaPredicted RBP11.44□□□□□ -0.58
TRUB1-201ENST00000298746 A8MU76 341 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 CCL22O00626 93 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 TBC1D4O60343 1298 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 TXNP10599 105 aaKnown RBP11.44□□□□□ -0.58
TRUB1-201ENST00000298746 SLC1A2P43004 574 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 NSUN2Q08J23 767 aaKnown RBP eCLIP11.44□□□□□ -0.58
TRUB1-201ENST00000298746 C6orf10Q5SRN2 563 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 ARHGAP17Q68EM7 881 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 DHRS4L2Q6PKH6 230 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 FRA10AC1Q70Z53 315 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 CATSPER4Q7RTX7 472 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 PRDM16Q9HAZ2 1276 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 SLX4Q8IY92 1834 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 KIAA1217Q5T5P2 1943 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 A8MT66 165 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 TRIM24O15164 1050 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 APBA3O96018 575 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 RBP1P09455 135 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 SBK3P0C264 359 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 CYP2C9P11712 490 aa11.44□□□□□ -0.58
TRUB1-201ENST00000298746 INSRRP14616 1297 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms