RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 ATP5F1P24539 256 aaPredicted RBP13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 PTPN3P26045 913 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 NMBRP28336 390 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 RAB10P61026 200 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 AQP6Q13520 282 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 FAM209AQ5JX71 171 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 LDLRAP1Q5SW96 308 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 PRMT9Q6P2P2 845 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 PIGZQ86VD9 579 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 PARP8Q8N3A8 854 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 FKBP10Q96AY3 582 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 LRCH3Q96II8 777 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 BEGAINQ9BUH8 593 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 RPAP3Q9H6T3 665 aaPredicted RBP13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 HMG20AQ9NP66 347 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 QPCTLQ9NXS2 382 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 MAP10Q9P2G4 905 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 EGFL7Q9UHF1 273 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 PRELID1Q9Y255 219 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 ST14Q9Y5Y6 855 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 KCNK1O00180 336 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 B4GAT1O43505 415 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 ABCB7O75027 752 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 RSL1D1O76021 490 aaKnown RBP13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 MYL3P08590 195 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 ELK4P28324 431 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 ICAM3P32942 547 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 MXD4Q14582 209 aaPredicted RBP13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 SPCS2Q15005 226 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 PAFAH1B3Q15102 231 aaKnown RBP13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 SOWAHAQ2M3V2 549 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 ARL13BQ3SXY8 428 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 CUZD1Q86UP6 607 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 CEP97Q8IW35 865 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 MFSD6LQ8IWD5 586 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 TTC39CQ8N584 583 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 LSM14AQ8ND56 463 aaKnown RBP13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 MAGEE2Q8TD90 523 aaPredicted RBP13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 MAGED4Q96JG8 741 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 MRPL57Q9BQC6 102 aaKnown RBP13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 FZD8Q9H461 694 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 MAGEE1Q9HCI5 957 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 INTS10Q9NVR2 710 aaKnown RBP13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 ERVK-11Q9UQG0 969 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 ERI2A8K979 691 aaKnown RBP13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 FXYD1O00168 92 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 ARPC2O15144 300 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 SYNCRIPO60506 623 aaKnown RBP13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 AHSGP02765 367 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 CYP2B6P20813 491 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 LEPRP48357 1165 aaKnown RBP13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 POLD2P49005 469 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 NPY2RP49146 381 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 HNRNPFP52597 415 aaKnown RBP13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 PLA2G16P53816 162 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 SNX17Q15036 470 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 PERM1Q5SV97 790 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 FKBP1CQ5VVH2 108 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 CYHR1Q6ZMK1 362 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 STRADAQ7RTN6 431 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 TFAP2DQ7Z6R9 452 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 ANKRD13BQ86YJ7 626 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 TP53INP2Q8IXH6 220 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 SPATA6LQ8N4H0 392 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 MINDY1Q8N5J2 469 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 REPS2Q8NFH8 660 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 RNF139Q8WU17 664 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 MLPHQ9BV36 600 aaPredicted RBP13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 HERC2P3Q9BVR0 1158 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 PARVBQ9HBI1 364 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 SETD4Q9NVD3 440 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 GMIPQ9P107 970 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 ANKMY1Q9P2S6 941 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 RABL2AQ9UBK7 228 aaPredicted RBP13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 KLHL3Q9UH77 587 aa13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 MAGED2Q9UNF1 606 aaPredicted RBP13.56□□□□□ -0.24
RPUSD4-201ENST00000298317 NEMP2A6NFY4 417 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 H0Y858 1186 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 TPPPO94811 219 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 GPX3P22352 226 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 EEF1B2P24534 225 aaKnown RBP13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 GSTM2P28161 218 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 EEF1DP29692 281 aaKnown RBP13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 SNX16P57768 344 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 IFITM3Q01628 133 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 PRPSAP1Q14558 356 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 LINC00299Q6ZSB3 139 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 LARP4Q71RC2 724 aaKnown RBP eCLIP13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 CYP2U1Q7Z449 544 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 NT5DC4Q86YG4 428 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 PAPD5Q8NDF8 572 aaKnown RBP13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 EML4Q9HC35 981 aaKnown RBP13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 TLR9Q9NR96 1032 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 CMTM6Q9NX76 183 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 RBMX2Q9Y388 322 aaKnown RBP13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 TLL2Q9Y6L7 1015 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 TCRBV5S2A0A599 114 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 BCAS1O75363 584 aaPredicted RBP13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 STMN1P16949 149 aa13.55□□□□□ -0.24
RPUSD4-201ENST00000298317 YWHAQP27348 245 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms