RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 SCML4Q8N228 414 aa19.26■□□□□ 0.67
TRA2A-201ENST00000297071 PDPRQ8NCN5 879 aa19.26■□□□□ 0.67
TRA2A-201ENST00000297071 COX4I2Q96KJ9 171 aa19.26■□□□□ 0.67
TRA2A-201ENST00000297071 MYRFLQ96LU7 910 aa19.26■□□□□ 0.67
TRA2A-201ENST00000297071 OMDQ99983 421 aa19.26■□□□□ 0.67
TRA2A-201ENST00000297071 COLEC11Q9BWP8 271 aa19.26■□□□□ 0.67
TRA2A-201ENST00000297071 ANLNQ9NQW6 1124 aa19.26■□□□□ 0.67
TRA2A-201ENST00000297071 ACSS2Q9NR19 701 aa19.26■□□□□ 0.67
TRA2A-201ENST00000297071 GID8Q9NWU2 228 aa19.26■□□□□ 0.67
TRA2A-201ENST00000297071 FZD1Q9UP38 647 aa19.26■□□□□ 0.67
TRA2A-201ENST00000297071 SMIM28A0A1B0GU29 152 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 GOLGA8TH3BQL2 631 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 GABRDO14764 452 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 TNPO2O14787 897 aaKnown RBP19.25■□□□□ 0.67
TRA2A-201ENST00000297071 INHBBP09529 407 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 CKMT2P17540 419 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 PSMA4P25789 261 aaKnown RBP19.25■□□□□ 0.67
TRA2A-201ENST00000297071 CCT8P50990 548 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 CTBP1Q13363 440 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 TBCELQ5QJ74 424 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 MARCH8Q5T0T0 291 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 ESRP1Q6NXG1 681 aaKnown RBP19.25■□□□□ 0.67
TRA2A-201ENST00000297071 ABRAXAS1Q6UWZ7 409 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 HFE2Q6ZVN8 426 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 FUNDC1Q8IVP5 155 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 TRPV3Q8NET8 790 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 GRIN3AQ8TCU5 1115 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 PPP1R16BQ96T49 567 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 PDGFCQ9NRA1 345 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 GJD2Q9UKL4 321 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 ANKRD36A6QL64 1941 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 SYNJ2BP-COX16A0A087WUM0 186 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 RRN3P2A6NIE6 340 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 CXCL11O14625 94 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 PAPSS2O95340 614 aaPredicted RBP19.25■□□□□ 0.67
TRA2A-201ENST00000297071 HNRNPLP14866 589 aaKnown RBP eCLIP19.25■□□□□ 0.67
TRA2A-201ENST00000297071 PORP16435 677 aaPredicted RBP19.25■□□□□ 0.67
TRA2A-201ENST00000297071 JUNBP17275 347 aaPredicted RBP19.25■□□□□ 0.67
TRA2A-201ENST00000297071 FGFR3P22607 806 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 TPP2P29144 1249 aaPredicted RBP19.25■□□□□ 0.67
TRA2A-201ENST00000297071 GRIA3P42263 894 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 PHEXP78562 749 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 GRIK2Q13002 908 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 GRIK4Q16099 956 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 GPR162Q16538 588 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 PDCD4Q53EL6 469 aaKnown RBP19.25■□□□□ 0.67
TRA2A-201ENST00000297071 PRAMEF18Q5VWM3 479 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 CYP2R1Q6VVX0 501 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 FAM43BQ6ZT52 329 aaPredicted RBP19.25■□□□□ 0.67
TRA2A-201ENST00000297071 BEND5Q7L4P6 421 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 CATSPER4Q7RTX7 472 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 PTRH1Q86Y79 214 aaKnown RBP19.25■□□□□ 0.67
TRA2A-201ENST00000297071 EPHX4Q8IUS5 362 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 CLYBLQ8N0X4 340 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 TDRD1Q9BXT4 1180 aaKnown RBP19.25■□□□□ 0.67
TRA2A-201ENST00000297071 ULBP1Q9BZM6 244 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 RPF2Q9H7B2 306 aaKnown RBP19.25■□□□□ 0.67
TRA2A-201ENST00000297071 CXorf21Q9HAI6 301 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 ARNT2Q9HBZ2 717 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 COX16Q9P0S2 106 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 PATJQ8NI35 1801 aa19.25■□□□□ 0.67
TRA2A-201ENST00000297071 IQCA1LA6NCM1 817 aa19.24■□□□□ 0.67
TRA2A-201ENST00000297071 NRP1O14786 923 aa19.24■□□□□ 0.67
TRA2A-201ENST00000297071 PLXNB2O15031 1838 aa19.24■□□□□ 0.67
TRA2A-201ENST00000297071 CAPGP40121 348 aa19.24■□□□□ 0.67
TRA2A-201ENST00000297071 STT3AP46977 705 aa19.24■□□□□ 0.67
TRA2A-201ENST00000297071 NDUFV1P49821 464 aa19.24■□□□□ 0.67
TRA2A-201ENST00000297071 SNX17Q15036 470 aa19.24■□□□□ 0.67
TRA2A-201ENST00000297071 MOGQ16653 247 aa19.24■□□□□ 0.67
TRA2A-201ENST00000297071 DALRD3Q5D0E6 543 aaKnown RBP19.24■□□□□ 0.67
TRA2A-201ENST00000297071 COL13A1Q5TAT6 717 aaPredicted RBP19.24■□□□□ 0.67
TRA2A-201ENST00000297071 NEPROQ6NW34 567 aa19.24■□□□□ 0.67
TRA2A-201ENST00000297071 TAPT1Q6NXT6 567 aa19.24■□□□□ 0.67
TRA2A-201ENST00000297071 USP51Q70EK9 711 aa19.24■□□□□ 0.67
TRA2A-201ENST00000297071 LRRC49Q8IUZ0 686 aa19.24■□□□□ 0.67
TRA2A-201ENST00000297071 RNF168Q8IYW5 571 aaPredicted RBP19.24■□□□□ 0.67
TRA2A-201ENST00000297071 CBR4Q8N4T8 237 aa19.24■□□□□ 0.67
TRA2A-201ENST00000297071 ITPKCQ96DU7 683 aa19.24■□□□□ 0.67
TRA2A-201ENST00000297071 EIF2AQ9BY44 585 aaKnown RBP19.24■□□□□ 0.67
TRA2A-201ENST00000297071 LIN28AQ9H9Z2 209 aaKnown RBP19.24■□□□□ 0.67
TRA2A-201ENST00000297071 TBC1D13Q9NVG8 400 aa19.24■□□□□ 0.67
TRA2A-201ENST00000297071 TMEM45AQ9NWC5 275 aa19.24■□□□□ 0.67
TRA2A-201ENST00000297071 ARHGEF38Q9NXL2 777 aa19.24■□□□□ 0.67
TRA2A-201ENST00000297071 OR12D3Q9UGF7 316 aa19.24■□□□□ 0.67
TRA2A-201ENST00000297071 EBF1Q9UH73 591 aa19.24■□□□□ 0.67
TRA2A-201ENST00000297071 ZNF639Q9UID6 485 aa19.24■□□□□ 0.67
TRA2A-201ENST00000297071 ZFC3H1O60293 1989 aaKnown RBP19.24■□□□□ 0.67
TRA2A-201ENST00000297071 NYNRINQ9P2P1 1898 aaKnown RBP19.24■□□□□ 0.67
TRA2A-201ENST00000297071 TYW5A2RUC4 315 aaKnown RBP19.23■□□□□ 0.67
TRA2A-201ENST00000297071 SOBPA7XYQ1 873 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 H0YAE9 185 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 NME4O00746 187 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 BEST1O76090 585 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 LRIG2O94898 1065 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 ZBTB7AO95365 584 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 HOXB8P17481 243 aaPredicted RBP19.23■□□□□ 0.67
TRA2A-201ENST00000297071 HOXC13P31276 330 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 EPHX2P34913 555 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 CDH15P55291 814 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 PLOD1Q02809 727 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms