RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 DPP6P42658 865 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 PKNOX1P55347 436 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 C1QTNF8P60827 252 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 SATB1Q01826 763 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 ACAP2Q15057 778 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 TRIP10Q15642 601 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 ZNF423Q2M1K9 1284 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 PARP15Q460N3 678 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 SFT2D3Q587I9 215 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 GPR158Q5T848 1215 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 TMEM207Q6UWW9 146 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 SDCCAG8Q86SQ7 713 aaPredicted RBP9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 PIM3Q86V86 326 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 PGAM4Q8N0Y7 254 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 PELI3Q8N2H9 469 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 SH3RF2Q8TEC5 729 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 USP13Q92995 863 aaPredicted RBP9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 PPP2R3CQ969Q6 453 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 SEPT5Q99719 369 aaPredicted RBP9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 SEMA3CQ99985 751 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 POLR1EQ9GZS1 481 aaKnown RBP9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 VCX3BQ9H321 246 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 WDR41Q9HAD4 459 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 CRYL1Q9Y2S2 319 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 TCAF2A6NFQ2 919 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 MUSKO15146 869 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 RTN3O95197 1032 aaPredicted RBP9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 WISP3O95389 354 aaPredicted RBP9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 XRCC1P18887 633 aaPredicted RBP9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 MSX2P35548 267 aaPredicted RBP9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 PBX3P40426 434 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 AQP4P55087 323 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 ART3Q13508 389 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 MRPL58Q14197 206 aaKnown RBP9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 FLOT2Q14254 428 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 PTPRCAPQ14761 206 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 EML3Q32P44 896 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 MGAT5BQ3V5L5 792 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 NADSYN1Q6IA69 706 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 CUZD1Q86UP6 607 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 RNF148Q8N7C7 305 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 SPPL2BQ8TCT7 592 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 BLOC1S5Q8TDH9 187 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 IFT43Q96FT9 208 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 TBATAQ96M53 351 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 GLT1D1Q96MS3 346 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 NPAS2Q99743 824 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 YIPF3Q9GZM5 350 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 ALG9Q9H6U8 611 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 CCSER2Q9H7U1 834 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 EFCAB1Q9HAE3 211 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 EML4Q9HC35 981 aaKnown RBP9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 ZDHHC7Q9NXF8 308 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 RNF186Q9NXI6 227 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 VPS28Q9UK41 221 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 ARL5AQ9Y689 179 aa9.34□□□□□ -0.91
UBLCP1-201ENST00000296786 MTMR11A4FU01 709 aa9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 STX16-NPEPL1H3BU86 382 aa9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 CASQ2O14958 399 aaPredicted RBP9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 MAP3K13O43283 966 aa9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 VNN2O95498 520 aa9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 SLC4A1P02730 911 aa9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 LYNP07948 512 aa9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 KCNC1P48547 511 aa9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 CEACAM7Q14002 265 aa9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 GALNT3Q14435 633 aa9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 ZNF235Q14590 738 aa9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 RNF220Q5VTB9 566 aa9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 FAM219BQ5XKK7 198 aa9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 RSPO2Q6UXX9 243 aaPredicted RBP9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 GK5Q6ZS86 529 aa9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 SLC22A9Q8IVM8 553 aa9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 PHC3Q8NDX5 983 aa9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 TMA16Q96EY4 203 aaKnown RBP9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 DNAJC1Q96KC8 554 aaKnown RBP9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 DDX50Q9BQ39 737 aaKnown RBP9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 GSTO2Q9H4Y5 243 aa9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 MEAF6Q9HAF1 191 aa9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 HCSTQ9UBK5 93 aa9.33□□□□□ -0.92
UBLCP1-201ENST00000296786 OR6C75A6NL08 312 aa9.32□□□□□ -0.92
UBLCP1-201ENST00000296786 TLR5O60602 858 aa9.32□□□□□ -0.92
UBLCP1-201ENST00000296786 PRAMEF11O60813 436 aa9.32□□□□□ -0.92
UBLCP1-201ENST00000296786 RNASEH1O60930 286 aaKnown RBP9.32□□□□□ -0.92
UBLCP1-201ENST00000296786 GLP2RO95838 553 aa9.32□□□□□ -0.92
UBLCP1-201ENST00000296786 GOT2P00505 430 aaKnown RBP9.32□□□□□ -0.92
UBLCP1-201ENST00000296786 PIRTP0C851 137 aa9.32□□□□□ -0.92
UBLCP1-201ENST00000296786 ZCCHC18P0CG32 403 aa9.32□□□□□ -0.92
UBLCP1-201ENST00000296786 HSPA1AP0DMV8 641 aaKnown RBP9.32□□□□□ -0.92
UBLCP1-201ENST00000296786 HSPA1BP0DMV9 641 aaKnown RBP9.32□□□□□ -0.92
UBLCP1-201ENST00000296786 MAPKAPK2P49137 400 aa9.32□□□□□ -0.92
UBLCP1-201ENST00000296786 YBEYP58557 167 aaPredicted RBP9.32□□□□□ -0.92
UBLCP1-201ENST00000296786 MRPS22P82650 360 aaKnown RBP9.32□□□□□ -0.92
UBLCP1-201ENST00000296786 MS4A2Q01362 244 aa9.32□□□□□ -0.92
UBLCP1-201ENST00000296786 RING1Q06587 406 aa9.32□□□□□ -0.92
UBLCP1-201ENST00000296786 PPP1R3AQ16821 1122 aa9.32□□□□□ -0.92
UBLCP1-201ENST00000296786 FAM45BPQ6NSW5 357 aa9.32□□□□□ -0.92
UBLCP1-201ENST00000296786 RNF19BQ6ZMZ0 732 aa9.32□□□□□ -0.92
UBLCP1-201ENST00000296786 CHSY3Q70JA7 882 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms