RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 TRAPPC9Q96Q05 1148 aa17.29■□□□□ 0.36
CDCP1-201ENST00000296129 QSOX1O00391 747 aa17.29■□□□□ 0.36
CDCP1-201ENST00000296129 CXCR2P25025 360 aa17.29■□□□□ 0.36
CDCP1-201ENST00000296129 GUCA1AP43080 201 aaPredicted RBP17.29■□□□□ 0.36
CDCP1-201ENST00000296129 PTPN9P43378 593 aa17.29■□□□□ 0.36
CDCP1-201ENST00000296129 SLC10A6Q3KNW5 377 aa17.29■□□□□ 0.36
CDCP1-201ENST00000296129 GATAD2AQ86YP4 633 aa17.29■□□□□ 0.36
CDCP1-201ENST00000296129 MRPL48Q96GC5 212 aaKnown RBP17.29■□□□□ 0.36
CDCP1-201ENST00000296129 AJAP1Q9UKB5 411 aaPredicted RBP17.29■□□□□ 0.36
CDCP1-201ENST00000296129 SNX10Q9Y5X0 201 aa17.29■□□□□ 0.36
CDCP1-201ENST00000296129 ATRNL1Q5VV63 1379 aa17.29■□□□□ 0.36
CDCP1-201ENST00000296129 PTGES3LE9PB15 166 aa17.29■□□□□ 0.36
CDCP1-201ENST00000296129 EPORP19235 508 aa17.29■□□□□ 0.36
CDCP1-201ENST00000296129 WARSP23381 471 aaKnown RBP17.29■□□□□ 0.36
CDCP1-201ENST00000296129 GTF2E2P29084 291 aaKnown RBP17.29■□□□□ 0.36
CDCP1-201ENST00000296129 POLD2P49005 469 aa17.29■□□□□ 0.36
CDCP1-201ENST00000296129 NKD2Q969F2 451 aaPredicted RBP17.29■□□□□ 0.36
CDCP1-201ENST00000296129 ACBD6Q9BR61 282 aa17.29■□□□□ 0.36
CDCP1-201ENST00000296129 TRIM38O00635 465 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 CRHR1P34998 444 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 HECTD2Q5U5R9 776 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 DLK2Q6UY11 383 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 DPP10Q8N608 796 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 NELL1Q92832 810 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 CHRAC1Q9NRG0 131 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 ENOPH1Q9UHY7 261 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 SPEF2Q9C093 1822 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 CACNA1FO60840 1977 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 TAC4Q86UU9 113 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 ADHFE1Q8IWW8 467 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 IQCKQ8N0W5 287 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 ZFRQ96KR1 1074 aaKnown RBP17.28■□□□□ 0.36
CDCP1-201ENST00000296129 ZMAT2Q96NC0 199 aaKnown RBP17.28■□□□□ 0.36
CDCP1-201ENST00000296129 COPS8Q99627 209 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 SLC39A8Q9C0K1 460 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 SDCBP2Q9H190 292 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 RBPJLQ9UBG7 517 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 GGA2Q9UJY4 613 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 GRM6O15303 877 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 C1RP00736 705 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 ELFN1P0C7U0 828 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 FEN1P39748 380 aaKnown RBP17.28■□□□□ 0.36
CDCP1-201ENST00000296129 ANGPT1Q15389 498 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 USP39Q53GS9 565 aaKnown RBP17.28■□□□□ 0.36
CDCP1-201ENST00000296129 ARHGEF4Q9NR80 690 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 PLLPQ9Y342 182 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 TPRKBQ9Y3C4 175 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 KRT36O76013 467 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 RHOQP17081 205 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 MAGEE2Q8TD90 523 aaPredicted RBP17.28■□□□□ 0.36
CDCP1-201ENST00000296129 LPIN3Q9BQK8 851 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 ABCG8Q9H221 673 aa17.28■□□□□ 0.36
CDCP1-201ENST00000296129 SLC25A14O95258 325 aaPredicted RBP17.27■□□□□ 0.36
CDCP1-201ENST00000296129 CDH13P55290 713 aa17.27■□□□□ 0.36
CDCP1-201ENST00000296129 SEMA5AQ13591 1074 aa17.27■□□□□ 0.36
CDCP1-201ENST00000296129 ZC3H7AQ8IWR0 971 aaKnown RBP17.27■□□□□ 0.36
CDCP1-201ENST00000296129 COL26A1Q96A83 441 aa17.27■□□□□ 0.36
CDCP1-201ENST00000296129 ADH1CP00326 375 aa17.27■□□□□ 0.36
CDCP1-201ENST00000296129 CPSF6Q16630 551 aaKnown RBP eCLIP17.27■□□□□ 0.36
CDCP1-201ENST00000296129 CUZD1Q86UP6 607 aa17.27■□□□□ 0.36
CDCP1-201ENST00000296129 OR4K2Q8NGD2 314 aa17.27■□□□□ 0.36
CDCP1-201ENST00000296129 C2CD4BA6NLJ0 364 aa17.27■□□□□ 0.36
CDCP1-201ENST00000296129 RECQL5O94762 991 aaPredicted RBP17.27■□□□□ 0.36
CDCP1-201ENST00000296129 DSC2Q02487 901 aa17.27■□□□□ 0.36
CDCP1-201ENST00000296129 ZNF697Q5TEC3 545 aa17.27■□□□□ 0.36
CDCP1-201ENST00000296129 ZNF605Q86T29 641 aa17.27■□□□□ 0.36
CDCP1-201ENST00000296129 EPHX4Q8IUS5 362 aa17.27■□□□□ 0.36
CDCP1-201ENST00000296129 CLYBLQ8N0X4 340 aa17.27■□□□□ 0.36
CDCP1-201ENST00000296129 ZNF655Q8N720 491 aaPredicted RBP17.27■□□□□ 0.36
CDCP1-201ENST00000296129 C12orf50Q8NA57 414 aaPredicted RBP17.27■□□□□ 0.36
CDCP1-201ENST00000296129 OR8D1Q8WZ84 308 aa17.27■□□□□ 0.36
CDCP1-201ENST00000296129 CXorf40BQ96DE9 158 aa17.27■□□□□ 0.36
CDCP1-201ENST00000296129 ZC4H2Q9NQZ6 224 aa17.27■□□□□ 0.36
CDCP1-201ENST00000296129 RHBDL2Q9NX52 303 aa17.27■□□□□ 0.36
CDCP1-201ENST00000296129 ZFP37Q9Y6Q3 630 aaPredicted RBP17.27■□□□□ 0.36
CDCP1-201ENST00000296129 FOXO6A8MYZ6 492 aa17.27■□□□□ 0.35
CDCP1-201ENST00000296129 ENTPD5O75356 428 aa17.27■□□□□ 0.35
CDCP1-201ENST00000296129 MPSTP25325 297 aa17.27■□□□□ 0.35
CDCP1-201ENST00000296129 ANKS1BQ7Z6G8 1248 aa17.27■□□□□ 0.35
CDCP1-201ENST00000296129 CLVS1Q8IUQ0 354 aaPredicted RBP17.27■□□□□ 0.35
CDCP1-201ENST00000296129 OR8H2Q8N162 312 aa17.27■□□□□ 0.35
CDCP1-201ENST00000296129 NUDT14O95848 222 aa17.27■□□□□ 0.35
CDCP1-201ENST00000296129 CCNCP24863 283 aa17.27■□□□□ 0.35
CDCP1-201ENST00000296129 FUT10Q6P4F1 479 aa17.27■□□□□ 0.35
CDCP1-201ENST00000296129 CRTC3Q6UUV7 619 aa17.27■□□□□ 0.35
CDCP1-201ENST00000296129 APTXQ7Z2E3 356 aaKnown RBP17.27■□□□□ 0.35
CDCP1-201ENST00000296129 FGD2Q7Z6J4 655 aa17.27■□□□□ 0.35
CDCP1-201ENST00000296129 SKA1Q96BD8 255 aa17.27■□□□□ 0.35
CDCP1-201ENST00000296129 ZFYVE1Q9HBF4 777 aa17.27■□□□□ 0.35
CDCP1-201ENST00000296129 CYLDQ9NQC7 956 aa17.27■□□□□ 0.35
CDCP1-201ENST00000296129 KLHL3Q9UH77 587 aa17.27■□□□□ 0.35
CDCP1-201ENST00000296129 FZD10Q9ULW2 581 aa17.27■□□□□ 0.35
CDCP1-201ENST00000296129 RAI2Q9Y5P3 530 aa17.27■□□□□ 0.35
CDCP1-201ENST00000296129 M0R2N6 131 aa17.26■□□□□ 0.35
CDCP1-201ENST00000296129 AP2A1O95782 977 aa17.26■□□□□ 0.35
CDCP1-201ENST00000296129 EIF2S1P05198 315 aaKnown RBP17.26■□□□□ 0.35
CDCP1-201ENST00000296129 HNF4AP41235 474 aa17.26■□□□□ 0.35
CDCP1-201ENST00000296129 ENPEPQ07075 957 aa17.26■□□□□ 0.35
CDCP1-201ENST00000296129 MPPE1Q53F39 396 aa17.26■□□□□ 0.35
CDCP1-201ENST00000296129 RNASEH2BQ5TBB1 312 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms