RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 MCCC1Q96RQ3 725 aaPredicted RBP27.86■■■□□ 2.05
CHCHD4-201ENST00000295767 EPB41L5Q9HCM4 733 aa27.86■■■□□ 2.05
CHCHD4-201ENST00000295767 CASS4Q9NQ75 786 aa27.86■■■□□ 2.05
CHCHD4-201ENST00000295767 GGT7Q9UJ14 662 aa27.86■■■□□ 2.05
CHCHD4-201ENST00000295767 CAPN8A6NHC0 703 aa27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 AREL1O15033 823 aa27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 SLC7A4O43246 635 aa27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 ZNF217O75362 1048 aa27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 FAM193AP78312 1265 aa27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 CALCOCO2Q13137 446 aa27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 USP45Q70EL2 814 aa27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 BBOF1Q8ND07 529 aa27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 MCUQ8NE86 351 aa27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 B4GALT6Q9UBX8 382 aa27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 ANAPC5Q9UJX4 755 aa27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 SHOC2Q9UQ13 582 aa27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 FADS3Q9Y5Q0 445 aa27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 SCN8AQ9UQD0 1980 aa27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 DOCK9Q9BZ29 2069 aa27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 NPIPB15A6NHN6 443 aaPredicted RBP27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 PLRG1O43660 514 aaKnown RBP27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 HNF1BP35680 557 aa27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 SUOXP51687 545 aa27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 ADPRHP54922 357 aa27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 DRG2P55039 364 aaKnown RBP27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 CDH17Q12864 832 aa27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 DNAAF3Q8N9W5 541 aa27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 OR14C36Q8NHC7 312 aa27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 FBXO4Q9UKT5 387 aa27.85■■■□□ 2.05
CHCHD4-201ENST00000295767 CEP192Q8TEP8 1941 aa27.84■■■□□ 2.05
CHCHD4-201ENST00000295767 ZNF318Q5VUA4 2279 aa27.84■■■□□ 2.05
CHCHD4-201ENST00000295767 A0A0U1RQS6 177 aa27.84■■■□□ 2.05
CHCHD4-201ENST00000295767 A8MX80 341 aa27.84■■■□□ 2.05
CHCHD4-201ENST00000295767 ACSL1P33121 698 aa27.84■■■□□ 2.05
CHCHD4-201ENST00000295767 MMP12P39900 470 aa27.84■■■□□ 2.05
CHCHD4-201ENST00000295767 FNTBP49356 437 aa27.84■■■□□ 2.05
CHCHD4-201ENST00000295767 ELP6Q0PNE2 266 aa27.84■■■□□ 2.05
CHCHD4-201ENST00000295767 ERAP2Q6P179 960 aa27.84■■■□□ 2.05
CHCHD4-201ENST00000295767 FRMD1Q8N878 549 aa27.84■■■□□ 2.05
CHCHD4-201ENST00000295767 C1QTNF1Q9BXJ1 281 aa27.84■■■□□ 2.05
CHCHD4-201ENST00000295767 SPO11Q9Y5K1 396 aa27.84■■■□□ 2.05
CHCHD4-201ENST00000295767 TRPM6Q9BX84 2022 aa27.83■■■□□ 2.05
CHCHD4-201ENST00000295767 CCDC163A0A0D9SF12 145 aa27.83■■■□□ 2.05
CHCHD4-201ENST00000295767 AP1G1O43747 822 aa27.83■■■□□ 2.05
CHCHD4-201ENST00000295767 TPH1P17752 444 aa27.83■■■□□ 2.05
CHCHD4-201ENST00000295767 SARNPP82979 210 aaKnown RBP27.83■■■□□ 2.05
CHCHD4-201ENST00000295767 MSLNQ13421 630 aaPredicted RBP27.83■■■□□ 2.05
CHCHD4-201ENST00000295767 MTM1Q13496 603 aa27.83■■■□□ 2.05
CHCHD4-201ENST00000295767 MAP7D1Q3KQU3 841 aa27.83■■■□□ 2.05
CHCHD4-201ENST00000295767 LRRC8BQ6P9F7 803 aa27.83■■■□□ 2.05
CHCHD4-201ENST00000295767 DPPA4Q7L190 304 aa27.83■■■□□ 2.05
CHCHD4-201ENST00000295767 CAND1Q86VP6 1230 aaKnown RBP27.83■■■□□ 2.05
CHCHD4-201ENST00000295767 FAM160A2Q8N612 972 aaPredicted RBP27.83■■■□□ 2.05
CHCHD4-201ENST00000295767 SERPINB12Q96P63 405 aa27.83■■■□□ 2.05
CHCHD4-201ENST00000295767 LYSMD1Q96S90 227 aa27.83■■■□□ 2.05
CHCHD4-201ENST00000295767 BTBD1Q9H0C5 482 aa27.83■■■□□ 2.05
CHCHD4-201ENST00000295767 IGHV1OR15-9A0A0B4J2B8 117 aa27.82■■■□□ 2.04
CHCHD4-201ENST00000295767 NDC80O14777 642 aa27.82■■■□□ 2.04
CHCHD4-201ENST00000295767 LHCGRP22888 699 aa27.82■■■□□ 2.04
CHCHD4-201ENST00000295767 NFKBIAP25963 317 aa27.82■■■□□ 2.04
CHCHD4-201ENST00000295767 RALGDSQ12967 914 aa27.82■■■□□ 2.04
CHCHD4-201ENST00000295767 TSPAN33Q86UF1 283 aa27.82■■■□□ 2.04
CHCHD4-201ENST00000295767 BLOC1S5Q8TDH9 187 aa27.82■■■□□ 2.04
CHCHD4-201ENST00000295767 MAGEE1Q9HCI5 957 aa27.82■■■□□ 2.04
CHCHD4-201ENST00000295767 INVSQ9Y283 1065 aa27.82■■■□□ 2.04
CHCHD4-201ENST00000295767 SMAPO00193 183 aa27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 CYP2A6P11509 494 aaPredicted RBP27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 VIPR1P32241 457 aa27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 CRTC1Q6UUV9 634 aa27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 ZDHHC24Q6UX98 284 aa27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 WDR5BQ86VZ2 330 aa27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 ART4Q93070 314 aa27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 TOE1Q96GM8 510 aaKnown RBP27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 SGK2Q9HBY8 427 aa27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 FAM114A2Q9NRY5 505 aa27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 WSB2Q9NYS7 404 aaPredicted RBP27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 ZNF711Q9Y462 761 aa27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 NEMP1O14524 444 aa27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 AVILO75366 819 aa27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 CD6P30203 668 aa27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 OXTRP30559 389 aa27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 PLTPP55058 493 aa27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 CERCAMQ5T4B2 595 aa27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 PWWP2AQ96N64 755 aa27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 EPC1Q9H2F5 836 aa27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 XAB2Q9HCS7 855 aaKnown RBP27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 V9GYY5 206 aaPredicted RBP27.81■■■□□ 2.04
CHCHD4-201ENST00000295767 MLNP12872 115 aa27.8■■■□□ 2.04
CHCHD4-201ENST00000295767 SESN2P58004 480 aaPredicted RBP27.8■■■□□ 2.04
CHCHD4-201ENST00000295767 TUBB4BP68371 445 aa27.8■■■□□ 2.04
CHCHD4-201ENST00000295767 ANGPT1Q15389 498 aa27.8■■■□□ 2.04
CHCHD4-201ENST00000295767 CDKN3Q16667 212 aa27.8■■■□□ 2.04
CHCHD4-201ENST00000295767 TMEM52BQ4KMG9 183 aa27.8■■■□□ 2.04
CHCHD4-201ENST00000295767 USP39Q53GS9 565 aaKnown RBP27.8■■■□□ 2.04
CHCHD4-201ENST00000295767 LYSMD3Q7Z3D4 306 aa27.8■■■□□ 2.04
CHCHD4-201ENST00000295767 LONP2Q86WA8 852 aa27.8■■■□□ 2.04
CHCHD4-201ENST00000295767 WRAP53Q9BUR4 548 aaKnown RBP27.8■■■□□ 2.04
CHCHD4-201ENST00000295767 KDM4CQ9H3R0 1056 aa27.8■■■□□ 2.04
CHCHD4-201ENST00000295767 GDF3Q9NR23 364 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms