RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 KPNA2P52292 529 aaKnown RBP15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 NME5P56597 212 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 C1QTNF8P60827 252 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 NSUN2Q08J23 767 aaKnown RBP eCLIP15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 SFT2D3Q587I9 215 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 NADSYN1Q6IA69 706 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 LAYNQ6UX15 382 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 BNC2Q6ZN30 1099 aaPredicted RBP15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 PPP1R2P1Q96PQ5 205 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 STARD7Q9NQZ5 370 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 ADA2Q9NZK5 511 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 CCDC167Q9P0B6 97 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 VTI1BQ9UEU0 232 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 SCOCQ9UIL1 159 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 LRRC14BA6NHZ5 514 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 SDHDO14521 159 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 GOT2P00505 430 aaKnown RBP15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 CLCN5P51795 746 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 BTKQ06187 659 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 FAM26DQ5JW98 314 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 RNF220Q5VTB9 566 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 CUZD1Q86UP6 607 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 LRRC49Q8IUZ0 686 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 WDR41Q9HAD4 459 aa15.87■□□□□ 0.13
NCKIPSD-201ENST00000294129 GREB1Q4ZG55 1949 aa15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 A0A0U1RQS6 177 aa15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 WASH4PA8MWX3 477 aa15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 SP100P23497 879 aaPredicted RBP15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 DPP6P42658 865 aa15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 LEPRP48357 1165 aaKnown RBP15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 AQP4P55087 323 aa15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 RPS24P62847 133 aaKnown RBP15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 FLOT2Q14254 428 aa15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 TRAF7Q6Q0C0 670 aa15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 PDCD6IPQ8WUM4 868 aaKnown RBP15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 TRPC7Q9HCX4 862 aa15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 VPS45Q9NRW7 570 aa15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 PCDHB7Q9Y5E2 793 aa15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 LDB2O43679 373 aa15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 ATXN1LP0C7T5 689 aaKnown RBP15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 IRF1P10914 325 aa15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 PMLP29590 882 aa15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 SLC11A1P49279 550 aa15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 PRKAA2P54646 552 aa15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 SERINC3Q13530 473 aa15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 RP9Q8TA86 221 aaKnown RBP15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 ZNF512Q96ME7 567 aaPredicted RBP15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 POLR1EQ9GZS1 481 aaKnown RBP15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 PIDD1Q9HB75 910 aa15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 ZBTB26Q9HCK0 441 aa15.86■□□□□ 0.13
NCKIPSD-201ENST00000294129 CCDC162PA2VCL2 907 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 SIX3O95343 332 aaPredicted RBP15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 S1PR4O95977 384 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 ALDH2P05091 517 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 PRDX6P30041 224 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 SCNN1BP51168 640 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 SEMA3AQ14563 771 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 MMEL1Q495T6 779 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 C16orf89Q6UX73 402 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 KIAA0408Q6ZU52 694 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 RMDN1Q96DB5 314 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 ARNT2Q9HBZ2 717 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 GIMAP2Q9UG22 337 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 TSR3Q9UJK0 312 aaKnown RBP15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 LRFN2Q9ULH4 789 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 FAM50BQ9Y247 325 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 PTGDR2Q9Y5Y4 395 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 F5H5T6 163 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 SLCO1B7G3V0H7 640 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 PPP6CO00743 305 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 ADAM12O43184 909 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 TSPAN3O60637 253 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 GPC4O75487 556 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 GLP2RO95838 553 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 TACR2P21452 398 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 TM4SF4P48230 202 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 NRG1Q02297 640 aaPredicted RBP15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 SP3Q02447 781 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 PTPRRQ15256 657 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 FUT10Q6P4F1 479 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 AAGABQ6PD74 315 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 CCDC117Q8IWD4 279 aaPredicted RBP15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 PHC3Q8NDX5 983 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 OR9I1Q8NGQ6 314 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 CEP70Q8NHQ1 597 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 CD99L2Q8TCZ2 262 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 BHMTQ93088 406 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 PTERQ96BW5 349 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 TSPAN17Q96FV3 270 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 TSC22D3Q99576 134 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 VCXQ9H320 206 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 FBRSL1Q9HCM7 1045 aaKnown RBP15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 ATP13A1Q9HD20 1204 aa15.85■□□□□ 0.13
NCKIPSD-201ENST00000294129 C9JVG2 144 aa15.84■□□□□ 0.13
NCKIPSD-201ENST00000294129 NPHS1O60500 1241 aa15.84■□□□□ 0.13
NCKIPSD-201ENST00000294129 CST5P28325 142 aaPredicted RBP15.84■□□□□ 0.13
NCKIPSD-201ENST00000294129 SLC6A4P31645 630 aa15.84■□□□□ 0.13
NCKIPSD-201ENST00000294129 MSLNQ13421 630 aaPredicted RBP15.84■□□□□ 0.13
NCKIPSD-201ENST00000294129 CEACAM7Q14002 265 aa15.84■□□□□ 0.13
NCKIPSD-201ENST00000294129 AGKQ53H12 422 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms