RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 BBS5Q8N3I7 341 aa9.84□□□□□ -0.83
CCDC58-201ENST00000291458 LZTR1Q8N653 840 aa9.84□□□□□ -0.83
CCDC58-201ENST00000291458 TP53I13Q8NBR0 393 aaPredicted RBP9.84□□□□□ -0.83
CCDC58-201ENST00000291458 ZNF548Q8NEK5 533 aaPredicted RBP9.84□□□□□ -0.83
CCDC58-201ENST00000291458 PCDH19Q8TAB3 1148 aa9.84□□□□□ -0.83
CCDC58-201ENST00000291458 SLC35G2Q8TBE7 412 aa9.84□□□□□ -0.83
CCDC58-201ENST00000291458 LMX1AQ8TE12 382 aa9.84□□□□□ -0.83
CCDC58-201ENST00000291458 GATA6Q92908 595 aa9.84□□□□□ -0.83
CCDC58-201ENST00000291458 TUBGCP5Q96RT8 1024 aa9.84□□□□□ -0.83
CCDC58-201ENST00000291458 C1QTNF7Q9BXJ2 289 aa9.84□□□□□ -0.83
CCDC58-201ENST00000291458 CPEB1Q9BZB8 566 aaKnown RBP9.84□□□□□ -0.83
CCDC58-201ENST00000291458 RBSNQ9H1K0 784 aa9.84□□□□□ -0.83
CCDC58-201ENST00000291458 GOLPH3Q9H4A6 298 aa9.84□□□□□ -0.83
CCDC58-201ENST00000291458 SYNDIG1Q9H7V2 258 aa9.84□□□□□ -0.83
CCDC58-201ENST00000291458 ERVMER34-1Q9H9K5 563 aa9.84□□□□□ -0.83
CCDC58-201ENST00000291458 DKK3Q9UBP4 350 aa9.84□□□□□ -0.83
CCDC58-201ENST00000291458 APOBEC3BQ9UH17 382 aaKnown RBP9.84□□□□□ -0.83
CCDC58-201ENST00000291458 ZMIZ1Q9ULJ6 1067 aa9.84□□□□□ -0.83
CCDC58-201ENST00000291458 MSRB2Q9Y3D2 182 aa9.84□□□□□ -0.83
CCDC58-201ENST00000291458 OR1A2Q9Y585 309 aa9.84□□□□□ -0.83
CCDC58-201ENST00000291458 PCDHGC4Q9Y5F7 938 aa9.84□□□□□ -0.83
CCDC58-201ENST00000291458 GOLGA4Q13439 2230 aaKnown RBP9.84□□□□□ -0.83
CCDC58-201ENST00000291458 ARID1BQ8NFD5 2236 aaPredicted RBP9.83□□□□□ -0.84
CCDC58-201ENST00000291458 TSPAN11A1L157 253 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 H3BM21 787 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 SPOPO43791 374 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 MAFKO60675 156 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 PROS1P07225 676 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 CELA2BP08218 269 aaPredicted RBP9.83□□□□□ -0.84
CCDC58-201ENST00000291458 NOP2P46087 812 aaKnown RBP9.83□□□□□ -0.84
CCDC58-201ENST00000291458 RXRGP48443 463 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 RENBPP51606 427 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 AP1S1P61966 158 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 DSC2Q02487 901 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 GBE1Q04446 702 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 RALGDSQ12967 914 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 EIF2B5Q13144 721 aaKnown RBP9.83□□□□□ -0.84
CCDC58-201ENST00000291458 RFTN1Q14699 578 aaPredicted RBP9.83□□□□□ -0.84
CCDC58-201ENST00000291458 GRM3Q14832 879 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 LRRC14Q15048 493 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 ACOX1Q15067 660 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 WSCD2Q2TBF2 565 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 TMEM52BQ4KMG9 183 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 ODF2Q5BJF6 829 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 FAXCQ5TGI0 409 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 HES3Q5TGS1 186 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 MARC1Q5VT66 337 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 CRTC1Q6UUV9 634 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 NPNTQ6UXI9 565 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 DBX2Q6ZNG2 339 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 RFX6Q8HWS3 928 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 HID1Q8IV36 788 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 PHACTR4Q8IZ21 702 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 SLC25A45Q8N413 288 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 DENND6BQ8NEG7 585 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 MDM1Q8TC05 714 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.83□□□□□ -0.84
CCDC58-201ENST00000291458 RFFLQ8WZ73 363 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 RAPGEF5Q92565 580 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 ZNF641Q96N77 438 aaPredicted RBP9.83□□□□□ -0.84
CCDC58-201ENST00000291458 SMIM14Q96QK8 99 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 ZNF670Q9BS34 389 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 CEP41Q9BYV8 373 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 NOD2Q9HC29 1040 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 SEPT10Q9P0V9 454 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 SIRPGQ9P1W8 387 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 B4GALT6Q9UBX8 382 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 KLF15Q9UIH9 416 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 MOSPD1Q9UJG1 213 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 PNMA8BQ9ULN7 279 aaPredicted RBP9.83□□□□□ -0.84
CCDC58-201ENST00000291458 HS3ST3A1Q9Y663 406 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 ACACBO00763 2458 aa9.83□□□□□ -0.84
CCDC58-201ENST00000291458 SPTY2D1-AS1A0A0U1RR47 76 aa9.82□□□□□ -0.84
CCDC58-201ENST00000291458 RECQL5O94762 991 aaPredicted RBP9.82□□□□□ -0.84
CCDC58-201ENST00000291458 PEX11BO96011 259 aa9.82□□□□□ -0.84
CCDC58-201ENST00000291458 SLC4A1P02730 911 aa9.82□□□□□ -0.84
CCDC58-201ENST00000291458 HLA-DQB2P05538 268 aa9.82□□□□□ -0.84
CCDC58-201ENST00000291458 KRT7P08729 469 aa9.82□□□□□ -0.84
CCDC58-201ENST00000291458 ALPIP09923 528 aa9.82□□□□□ -0.84
CCDC58-201ENST00000291458 NME1P15531 152 aaKnown RBP9.82□□□□□ -0.84
CCDC58-201ENST00000291458 IL4RP24394 825 aa9.82□□□□□ -0.84
CCDC58-201ENST00000291458 GARSP41250 739 aaKnown RBP9.82□□□□□ -0.84
CCDC58-201ENST00000291458 ARSEP51690 589 aa9.82□□□□□ -0.84
CCDC58-201ENST00000291458 ZNF75DP51815 510 aa9.82□□□□□ -0.84
CCDC58-201ENST00000291458 PFN3P60673 137 aa9.82□□□□□ -0.84
CCDC58-201ENST00000291458 HNRNPKP61978 463 aaKnown RBP eCLIP9.82□□□□□ -0.84
CCDC58-201ENST00000291458 GALNT2Q10471 571 aa9.82□□□□□ -0.84
CCDC58-201ENST00000291458 TBX2Q13207 712 aaPredicted RBP9.82□□□□□ -0.84
CCDC58-201ENST00000291458 CDKN3Q16667 212 aa9.82□□□□□ -0.84
CCDC58-201ENST00000291458 PRRT3Q5FWE3 981 aa9.82□□□□□ -0.84
CCDC58-201ENST00000291458 KCTD16Q68DU8 428 aa9.82□□□□□ -0.84
CCDC58-201ENST00000291458 DPPA4Q7L190 304 aa9.82□□□□□ -0.84
CCDC58-201ENST00000291458 PQLC3Q8N755 202 aa9.82□□□□□ -0.84
CCDC58-201ENST00000291458 PLA2G15Q8NCC3 412 aa9.82□□□□□ -0.84
CCDC58-201ENST00000291458 CCNYQ8ND76 341 aa9.82□□□□□ -0.84
CCDC58-201ENST00000291458 OR4C6Q8NH72 309 aa9.82□□□□□ -0.84
CCDC58-201ENST00000291458 TSACCQ96A04 125 aaPredicted RBP9.82□□□□□ -0.84
CCDC58-201ENST00000291458 CENPTQ96BT3 561 aa9.82□□□□□ -0.84
CCDC58-201ENST00000291458 ZNF830Q96NB3 372 aaPredicted RBP9.82□□□□□ -0.84
CCDC58-201ENST00000291458 ZNF599Q96NL3 588 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms