RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ALOX15P16050 662 aaPredicted RBP12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 ADSLP30566 484 aaPredicted RBP12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 CD52P31358 61 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 CHRNA4P43681 627 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 HARS2P49590 506 aaKnown RBP12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 CLCNKBP51801 687 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 SLC5A3P53794 718 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 RAB10P61026 200 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 DUSP28Q4G0W2 176 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 CGB2Q6NT52 195 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 FGD2Q7Z6J4 655 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 DCBLD1Q8N8Z6 715 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 DENND1AQ8TEH3 1009 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 HDAC10Q969S8 669 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 FAM120BQ96EK7 910 aaKnown RBP12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 CIB1Q99828 191 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 BCO2Q9BYV7 579 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 S100A14Q9HCY8 104 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 TIMMDC1Q9NPL8 285 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 PIGVQ9NUD9 493 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 PTPN3P26045 913 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 CRABP2P29373 138 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 AKT1P31749 480 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 PTPN9P43378 593 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 NCF4Q15080 339 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 PLCL1Q15111 1095 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 PLEKHG4Q58EX7 1191 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 LIPMQ5VYY2 423 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 NCBP2-AS2Q69YL0 99 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 C17orf50Q8WW18 174 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 SLC7A6OSQ96CW6 309 aaPredicted RBP12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 CCDC126Q96EE4 140 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 TBCDQ9BTW9 1192 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 SLC27A5Q9Y2P5 690 aa12.61□□□□□ -0.39
SLC6A1-201ENST00000287766 F5H5T6 163 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 SOAT2O75908 522 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 PCNAP12004 261 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 WNT3AP56704 352 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 PSME3P61289 254 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 ARHGAP1Q07960 439 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 BROXQ5VW32 411 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 ABRAXAS1Q6UWZ7 409 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 C8orf59Q8N0T1 100 aaPredicted RBP12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 AMER2Q8N7J2 671 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 VPS37AQ8NEZ2 397 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 DCUN1D1Q96GG9 259 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 PCED1BQ96HM7 432 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 VAT1Q99536 393 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 PDLIM7Q9NR12 457 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 VPS45Q9NRW7 570 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 SPASTQ9UBP0 616 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 SORCS3Q9UPU3 1222 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 DGKBQ9Y6T7 804 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 BTBD19C9JJ37 291 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 CCNKO75909 580 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 TALDO1P37837 337 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 CCR10P46092 362 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 TUFMP49411 452 aaKnown RBP12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 RAD51Q06609 339 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 KRT33BQ14525 404 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 FAM171A1Q5VUB5 890 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 AAGABQ6PD74 315 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 TP53INP2Q8IXH6 220 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 SUN5Q8TC36 379 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 TBC1D13Q9NVG8 400 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 COMMD8Q9NX08 183 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 VTI1BQ9UEU0 232 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 PRKAG3Q9UGI9 489 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 PAGE1O75459 146 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 DLDP09622 509 aaKnown RBP12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 IQCF3P0C7M6 154 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 SLC2A3P11169 496 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 NR6A1Q15406 480 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 SLC9B1Q4ZJI4 515 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 ANO7Q6IWH7 933 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 FAM126BQ8IXS8 530 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 SVOPQ8N4V2 548 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 ARFGAP1Q8N6T3 406 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 PTGR2Q8N8N7 351 aaPredicted RBP12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 DNAJB14Q8TBM8 379 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 ZHX1-C8orf76Q96EF9 292 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 SNX27Q96L92 541 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 SIGLEC10Q96LC7 697 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 GINS4Q9BRT9 223 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 SLC25A23Q9BV35 468 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 EBF3Q9H4W6 596 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 COQ6Q9Y2Z9 468 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 SMCHD1A6NHR9 2005 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 ANKRD12Q6UB98 2062 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 F8W810 466 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 C4BPBP20851 252 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 AXLP30530 894 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 IDH2P48735 452 aaKnown RBP12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 ATP12AP54707 1039 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 DPYSL2Q16555 572 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 PPM1LQ5SGD2 360 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 PKN3Q6P5Z2 889 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 NECAB2Q7Z6G3 386 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 EID3Q8N140 333 aa12.6□□□□□ -0.39
SLC6A1-201ENST00000287766 PHTF2Q8N3S3 785 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms