RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 GLT6D1Q7Z4J2 308 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 CALML6Q8TD86 181 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 COG4Q9H9E3 785 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 OXSMQ9NWU1 459 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.02■□□□□ 0.48
CAPN1-201ENST00000279247 A8MX80 341 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 TMEM233B4DJY2 109 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 KDELR3O43731 214 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 TMCC1O94876 653 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 GLP2RO95838 553 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 GKP32189 559 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 IDH3AP50213 366 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 ARF5P84085 180 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 FAM13CQ8NE31 585 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 TTC8Q8TAM2 541 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 MYRFLQ96LU7 910 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 PSKH2Q96QS6 385 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 CORO1BQ9BR76 489 aa18.02■□□□□ 0.48
CAPN1-201ENST00000279247 TACO1Q9BSH4 297 aaKnown RBP18.02■□□□□ 0.48
CAPN1-201ENST00000279247 MRM3Q9HC36 420 aaKnown RBP18.02■□□□□ 0.48
CAPN1-201ENST00000279247 SPTBN5Q9NRC6 3674 aaKnown RBP18.02■□□□□ 0.48
CAPN1-201ENST00000279247 ANAPC1Q9H1A4 1944 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 INSIG1O15503 277 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 ZMPSTE24O75844 475 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 IL1BP01584 269 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 CDKN1CP49918 316 aaPredicted RBP18.01■□□□□ 0.47
CAPN1-201ENST00000279247 CYTH1Q15438 398 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 SLC9B1Q4ZJI4 515 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 C1orf53Q5VUE5 145 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 GAREM2Q75VX8 874 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 TMEM151AQ8N4L1 468 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 PTCD3Q96EY7 689 aaKnown RBP18.01■□□□□ 0.47
CAPN1-201ENST00000279247 CADM1Q9BY67 442 aaKnown RBP18.01■□□□□ 0.47
CAPN1-201ENST00000279247 NUF2Q9BZD4 464 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 TAS2R1Q9NYW7 299 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 PCDHB12Q9Y5F1 795 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 MROH6A6NGR9 719 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 CD3EAPO15446 510 aaKnown RBP18.01■□□□□ 0.47
CAPN1-201ENST00000279247 CCDC22O60826 627 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 ENTPD5O75356 428 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 FGF1P05230 155 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 CTPS1P17812 591 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 HLA-DPA1P20036 260 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 KCNA5P22460 613 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 CSKP41240 450 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 SEMG2Q02383 582 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 PDCD2Q16342 344 aaPredicted RBP18.01■□□□□ 0.47
CAPN1-201ENST00000279247 FBXO48Q5FWF7 155 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 NXNQ6DKJ4 435 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 DDX53Q86TM3 631 aaKnown RBP18.01■□□□□ 0.47
CAPN1-201ENST00000279247 C7orf61Q8IZ16 206 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 FEM1CQ96JP0 617 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 MGME1Q9BQP7 344 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 POMKQ9H5K3 350 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 TLE6Q9H808 572 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 SAR1AQ9NR31 198 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 FAM50BQ9Y247 325 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 RAI2Q9Y5P3 530 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 ILVBLA1L0T0 632 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 CCL16O15467 120 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 KLHL2O95198 593 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 CXCL14O95715 111 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 NDST3O95803 873 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 LRG1P02750 347 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 EPHA3P29320 983 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 ZYG11AQ6WRX3 759 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 KLHL23Q8NBE8 558 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 ZFRQ96KR1 1074 aaKnown RBP18.01■□□□□ 0.47
CAPN1-201ENST00000279247 HERC2P3Q9BVR0 1158 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 ALG9Q9H6U8 611 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 HCFC1R1Q9NWW0 138 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 CFAP97Q9P2B7 532 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 CLEC4EQ9ULY5 219 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 ANKRD6Q9Y2G4 727 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 VWA7Q9Y334 891 aa18.01■□□□□ 0.47
CAPN1-201ENST00000279247 S1PR4O95977 384 aa18■□□□□ 0.47
CAPN1-201ENST00000279247 HADHAP40939 763 aa18■□□□□ 0.47
CAPN1-201ENST00000279247 LIPMQ5VYY2 423 aa18■□□□□ 0.47
CAPN1-201ENST00000279247 KLHDC10Q6PID8 442 aa18■□□□□ 0.47
CAPN1-201ENST00000279247 OVCA2Q8WZ82 227 aa18■□□□□ 0.47
CAPN1-201ENST00000279247 CLPTM1LQ96KA5 538 aa18■□□□□ 0.47
CAPN1-201ENST00000279247 RPL10LQ96L21 214 aaKnown RBP18■□□□□ 0.47
CAPN1-201ENST00000279247 MARK4Q96L34 752 aa18■□□□□ 0.47
CAPN1-201ENST00000279247 DCXO43602 365 aa18■□□□□ 0.47
CAPN1-201ENST00000279247 F11P03951 625 aa18■□□□□ 0.47
CAPN1-201ENST00000279247 CALB2P22676 271 aa18■□□□□ 0.47
CAPN1-201ENST00000279247 CRABP2P29373 138 aa18■□□□□ 0.47
CAPN1-201ENST00000279247 EPHB1P54762 984 aa18■□□□□ 0.47
CAPN1-201ENST00000279247 RHOAP61586 193 aa18■□□□□ 0.47
CAPN1-201ENST00000279247 HERC6Q8IVU3 1022 aa18■□□□□ 0.47
CAPN1-201ENST00000279247 MFN1Q8IWA4 741 aa18■□□□□ 0.47
CAPN1-201ENST00000279247 BBS7Q8IWZ6 715 aa18■□□□□ 0.47
CAPN1-201ENST00000279247 APCDD1Q8J025 514 aa18■□□□□ 0.47
CAPN1-201ENST00000279247 TXNDC5Q8NBS9 432 aaKnown RBP18■□□□□ 0.47
CAPN1-201ENST00000279247 MDGA1Q8NFP4 955 aa18■□□□□ 0.47
CAPN1-201ENST00000279247 KCNV2Q8TDN2 545 aa18■□□□□ 0.47
CAPN1-201ENST00000279247 INPP5DQ92835 1189 aa18■□□□□ 0.47
CAPN1-201ENST00000279247 BTBD10Q9BSF8 475 aa18■□□□□ 0.47
CAPN1-201ENST00000279247 ILKAPQ9H0C8 392 aaPredicted RBP18■□□□□ 0.47
CAPN1-201ENST00000279247 GTSE1Q9NYZ3 720 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms