RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 SPATC1LQ9H0A9 340 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 MYOM1P52179 1685 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 CELF2O95319 508 aaKnown RBP8.01□□□□□ -1.13
LIMD1-201ENST00000273317 ARF4P18085 180 aaPredicted RBP8.01□□□□□ -1.13
LIMD1-201ENST00000273317 CDK9P50750 372 aaKnown RBP8.01□□□□□ -1.13
LIMD1-201ENST00000273317 RTP1P59025 263 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 ATRNO75882 1429 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 PARP4Q9UKK3 1724 aaKnown RBP8.01□□□□□ -1.13
LIMD1-201ENST00000273317 FAM86C2PA6NEL3 165 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 SVOPLQ8N434 492 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 TSEN2Q8NCE0 465 aaKnown RBP8□□□□□ -1.13
LIMD1-201ENST00000273317 OR2T34Q8NGX1 318 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 OR2T3Q8NH03 318 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 PPP1R14BQ96C90 147 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 OR12D3Q9UGF7 316 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8□□□□□ -1.13
LIMD1-201ENST00000273317 EFR3BQ9Y2G0 817 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 AP4B1Q9Y6B7 739 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 GCATO75600 419 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 S100A6P06703 90 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 UBAP2LQ14157 1087 aaKnown RBP8□□□□□ -1.13
LIMD1-201ENST00000273317 SWT1Q5T5J6 900 aaKnown RBP8□□□□□ -1.13
LIMD1-201ENST00000273317 CPTPQ5TA50 214 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 SPESP1Q6UW49 350 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 SLCO6A1Q86UG4 719 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 CXorf40AQ8TE69 158 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 SOCS4Q8WXH5 440 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 TRIM2Q9C040 744 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 TOR4AQ9NXH8 423 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 RCOR3Q9P2K3 495 aaPredicted RBP8□□□□□ -1.13
LIMD1-201ENST00000273317 TEX46H3BTG2 121 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 SEMA3DO95025 777 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 DHFRP00374 187 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 DBTP11182 482 aaKnown RBP8□□□□□ -1.13
LIMD1-201ENST00000273317 IRF8Q02556 426 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 SLC30A8Q8IWU4 369 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 ELMO1Q92556 727 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 HSFY1Q96LI6 401 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 SEMA3GQ9NS98 782 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8□□□□□ -1.13
LIMD1-201ENST00000273317 RBMX2Q9Y388 322 aaKnown RBP8□□□□□ -1.13
LIMD1-201ENST00000273317 A0A1W2PQ72 361 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 LRRC10BA6NIK2 292 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 G3V2T6 193 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 H3BRB1 525 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 SLC25A12O75746 678 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 CST1P01037 141 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 ITGA2BP08514 1039 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 INSRRP14616 1297 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 KCNJ2P63252 427 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 KAT5Q92993 513 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 RHOBTB2Q9BYZ6 727 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 CRISPLD1Q9H336 500 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 TUT1Q9H6E5 874 aaKnown RBP8□□□□□ -1.13
LIMD1-201ENST00000273317 DCCP43146 1447 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 MCIDASD6RGH6 385 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 KRT36O76013 467 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 ASGR1P07306 291 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 PTX3P26022 381 aaPredicted RBP8□□□□□ -1.13
LIMD1-201ENST00000273317 GALNT3Q14435 633 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 PABPC1LQ4VXU2 614 aaKnown RBP8□□□□□ -1.13
LIMD1-201ENST00000273317 FAM117BQ6P1L5 589 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 PGBD2Q6P3X8 592 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 ATG14Q6ZNE5 492 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 CHST15Q7LFX5 561 aaPredicted RBP8□□□□□ -1.13
LIMD1-201ENST00000273317 EPS8L1Q8TE68 723 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 ACOT12Q8WYK0 555 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 MOV10Q9HCE1 1003 aaKnown RBP8□□□□□ -1.13
LIMD1-201ENST00000273317 TRPV2Q9Y5S1 764 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 MT-CO1P00395 513 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 PGK1P00558 417 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 RPL4P36578 427 aaKnown RBP8□□□□□ -1.13
LIMD1-201ENST00000273317 RAB15P59190 212 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 TRAPPC5Q8IUR0 188 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 DEFB106AQ8N104 65 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 HM13Q8TCT9 377 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 PIK3R3Q92569 461 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 DUSP9Q99956 384 aaKnown RBP8□□□□□ -1.13
LIMD1-201ENST00000273317 FDXACB1Q9BRP7 624 aaPredicted RBP8□□□□□ -1.13
LIMD1-201ENST00000273317 TMEM131LA2VDJ0 1609 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 HEATR1Q9H583 2144 aaKnown RBP8□□□□□ -1.13
LIMD1-201ENST00000273317 FAM237AA0A1B0GTK4 181 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 CDC40O60508 579 aaKnown RBP eCLIP8□□□□□ -1.13
LIMD1-201ENST00000273317 NR2F1P10589 423 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 PLK1P53350 603 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 SULT2A1Q06520 285 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 RIPPLY1Q0D2K3 151 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 BST1Q10588 318 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 ZFP69Q49AA0 526 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 OLFML2AQ68BL7 652 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 ZCCHC23Q6ZST2 131 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 SAPCD2Q86UD0 394 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 CDYL2Q8N8U2 506 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 TKTL2Q9H0I9 626 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 ZDHHC6Q9H6R6 413 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 CAB39LQ9H9S4 337 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 ZNF879B4DU55 563 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 OR10H2O60403 315 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 NR2F6P10588 404 aa8□□□□□ -1.13
LIMD1-201ENST00000273317 ZNF12P17014 697 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms