RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 IPO11Q9UI26 975 aaKnown RBP9.03□□□□□ -0.96
TPM3-201ENST00000271850 PADI4Q9UM07 663 aa9.03□□□□□ -0.96
TPM3-201ENST00000271850 TLN1Q9Y490 2541 aaKnown RBP9.03□□□□□ -0.96
TPM3-201ENST00000271850 NBPF19A0A087WUL8 3843 aa9.02□□□□□ -0.96
TPM3-201ENST00000271850 TMEM202A6NGA9 273 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 D6RAR5 112 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 IGSF6O95976 241 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 WT1P19544 449 aaPredicted RBP9.02□□□□□ -0.97
TPM3-201ENST00000271850 LORP23490 312 aaPredicted RBP9.02□□□□□ -0.97
TPM3-201ENST00000271850 ZNF143P52747 638 aaPredicted RBP9.02□□□□□ -0.97
TPM3-201ENST00000271850 THOP1P52888 689 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 GEMIN4P57678 1058 aaKnown RBP9.02□□□□□ -0.97
TPM3-201ENST00000271850 RHOAP61586 193 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 CCL7P80098 99 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 RHDQ02161 417 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 PPARDQ03181 441 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 VAC14Q08AM6 782 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 INPP5AQ14642 412 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 NFATC4Q14934 902 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 NCAPHQ15003 741 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 AGERQ15109 404 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 SYCP1Q15431 976 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 TGIF1Q15583 401 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 UGP2Q16851 508 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 LINC00303Q3SY05 128 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 AFMIDQ63HM1 303 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 FOXR1Q6PIV2 292 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 ZNF605Q86T29 641 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 CAMK1DQ8IU85 385 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 SDR16C5Q8N3Y7 309 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 ARL10Q8N8L6 244 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 TSEN2Q8NCE0 465 aaKnown RBP9.02□□□□□ -0.97
TPM3-201ENST00000271850 MSANTD4Q8NCY6 345 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 GPR156Q8NFN8 814 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 CCL4L1Q8NHW4 92 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 BTN2A2Q8WVV5 523 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 OR1E3Q8WZA6 343 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 WBP1Q96G27 269 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 LIN37Q96GY3 246 aaPredicted RBP9.02□□□□□ -0.97
TPM3-201ENST00000271850 APOOQ9BUR5 198 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 LGR4Q9BXB1 951 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 DPH1Q9BZG8 443 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 EDEM3Q9BZQ6 932 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 FOXP3Q9BZS1 431 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 SLC39A8Q9C0K1 460 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 FGF22Q9HCT0 170 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 MRPL40Q9NQ50 206 aaKnown RBP9.02□□□□□ -0.97
TPM3-201ENST00000271850 LMBRD1Q9NUN5 540 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 FANCLQ9NW38 375 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 ST14Q9Y5Y6 855 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 HECTD1Q9ULT8 2610 aa9.02□□□□□ -0.97
TPM3-201ENST00000271850 MAST4O15021 2626 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 CCDC187A0A096LP49 1063 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 ZSCAN5CA6NGD5 496 aaPredicted RBP9.01□□□□□ -0.97
TPM3-201ENST00000271850 TRAFD1O14545 582 aaPredicted RBP9.01□□□□□ -0.97
TPM3-201ENST00000271850 CREB3O43889 395 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 PRAMEF11O60813 436 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 TNFSF15O95150 251 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 FUCA1P04066 466 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 PCCBP05166 539 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 ANXA6P08133 673 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 ITGA2BP08514 1039 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 ETV5P41161 510 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 STAT1P42224 750 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 NSFP46459 744 aaKnown RBP9.01□□□□□ -0.97
TPM3-201ENST00000271850 LIG3P49916 1009 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 PEX5P50542 639 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 COPB1P53618 953 aaKnown RBP9.01□□□□□ -0.97
TPM3-201ENST00000271850 UCNP55089 124 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 YBEYP58557 167 aaPredicted RBP9.01□□□□□ -0.97
TPM3-201ENST00000271850 SRP54P61011 504 aaKnown RBP9.01□□□□□ -0.97
TPM3-201ENST00000271850 PTK2BQ14289 1009 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 LRRC14Q15048 493 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 PTPRRQ15256 657 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 TAF1BQ53T94 588 aaPredicted RBP9.01□□□□□ -0.97
TPM3-201ENST00000271850 FAXCQ5TGI0 409 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 E4F1Q66K89 784 aaPredicted RBP9.01□□□□□ -0.97
TPM3-201ENST00000271850 ENPP7Q6UWV6 458 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 TRIM72Q6ZMU5 477 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 HID1Q8IV36 788 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 MCOLN2Q8IZK6 566 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 EXD3Q8N9H8 876 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 WDR36Q8NI36 951 aaKnown RBP9.01□□□□□ -0.97
TPM3-201ENST00000271850 CASKIN2Q8WXE0 1202 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 NAT6Q93015 286 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 ECHDC3Q96DC8 303 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 ARHGEF26Q96DR7 871 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 KCTD15Q96SI1 283 aaPredicted RBP9.01□□□□□ -0.97
TPM3-201ENST00000271850 RBM15Q96T37 977 aaKnown RBP eCLIP9.01□□□□□ -0.97
TPM3-201ENST00000271850 SELENOOQ9BVL4 669 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 SLC13A1Q9BZW2 595 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 SUV39H2Q9H5I1 410 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 NCKIPSDQ9NZQ3 722 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 GULP1Q9UBP9 304 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 UBA2Q9UBT2 640 aaPredicted RBP9.01□□□□□ -0.97
TPM3-201ENST00000271850 LIMA1Q9UHB6 759 aaKnown RBP9.01□□□□□ -0.97
TPM3-201ENST00000271850 ATXN7L1Q9ULK2 861 aaPredicted RBP9.01□□□□□ -0.97
TPM3-201ENST00000271850 HPCAL4Q9UM19 191 aa9.01□□□□□ -0.97
TPM3-201ENST00000271850 ARHGEF17Q96PE2 2063 aaPredicted RBP9.01□□□□□ -0.97
TPM3-201ENST00000271850 COL12A1Q99715 3063 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms