RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 C1orf74Q96LT6 269 aa16.37■□□□□ 0.21
CTCF-201ENST00000264010 TLE6Q9H808 572 aa16.37■□□□□ 0.21
CTCF-201ENST00000264010 SYTL2Q9HCH5 934 aa16.37■□□□□ 0.21
CTCF-201ENST00000264010 SCUBE2Q9NQ36 999 aa16.37■□□□□ 0.21
CTCF-201ENST00000264010 SELENONQ9NZV5 590 aa16.37■□□□□ 0.21
CTCF-201ENST00000264010 CRYL1Q9Y2S2 319 aa16.37■□□□□ 0.21
CTCF-201ENST00000264010 AGRPO00253 132 aa16.37■□□□□ 0.21
CTCF-201ENST00000264010 MAFKO60675 156 aa16.37■□□□□ 0.21
CTCF-201ENST00000264010 ZMPSTE24O75844 475 aa16.37■□□□□ 0.21
CTCF-201ENST00000264010 FGF1P05230 155 aa16.37■□□□□ 0.21
CTCF-201ENST00000264010 CBLBQ13191 982 aa16.37■□□□□ 0.21
CTCF-201ENST00000264010 ATP13A1Q9HD20 1204 aa16.37■□□□□ 0.21
CTCF-201ENST00000264010 HMX2A2RU54 273 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 SUPT3HB4E1H0 165 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 PRRG1O14668 218 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 STX7O15400 261 aaKnown RBP16.36■□□□□ 0.21
CTCF-201ENST00000264010 GPR15P49685 360 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 FAM91A1Q658Y4 838 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 FAM45BPQ6NSW5 357 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 FAM45AQ8TCE6 357 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 DACT3Q96B18 629 aaPredicted RBP16.36■□□□□ 0.21
CTCF-201ENST00000264010 GCNAQ96QF7 691 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 RNF103-CHMP3A0A140T963 221 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 NT5C1B-RDH14C9J2C7 533 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 SRP72O76094 671 aaKnown RBP16.36■□□□□ 0.21
CTCF-201ENST00000264010 OCM2P0CE71 109 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 OCMP0CE72 109 aaPredicted RBP16.36■□□□□ 0.21
CTCF-201ENST00000264010 DNAJB1P25685 340 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 PIK3R1P27986 724 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 MAGEA11P43364 429 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 NAA20P61599 178 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 IL10RBQ08334 325 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 TCHHL1Q5QJ38 904 aaPredicted RBP16.36■□□□□ 0.21
CTCF-201ENST00000264010 RARS2Q5T160 578 aaKnown RBP16.36■□□□□ 0.21
CTCF-201ENST00000264010 PPP1R14BQ96C90 147 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 ZFYVE19Q96K21 471 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 TTPALQ9BTX7 342 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 GPBP1L1Q9HC44 474 aaPredicted RBP16.36■□□□□ 0.21
CTCF-201ENST00000264010 EMCNQ9ULC0 261 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 CBX4O00257 560 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 UBDO15205 165 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 TBX18O95935 607 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 ANPEPP15144 967 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 PRDX6P30041 224 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 MGAT3Q09327 533 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 DSC3Q14574 896 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 MAPK11Q15759 364 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 ZNF276Q8N554 614 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 GIPC3Q8TF64 312 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 RTP3Q9BQQ7 232 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 RTKNQ9BST9 563 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 MRM3Q9HC36 420 aaKnown RBP16.36■□□□□ 0.21
CTCF-201ENST00000264010 ACSS2Q9NR19 701 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 SLC2A6Q9UGQ3 507 aa16.36■□□□□ 0.21
CTCF-201ENST00000264010 BUD23O43709 281 aaKnown RBP16.35■□□□□ 0.21
CTCF-201ENST00000264010 TACR2P21452 398 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 PBX3P40426 434 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 MAPKAPK2P49137 400 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 RAP1GDS1P52306 607 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 ZNF460Q14592 562 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 HECTD3Q5T447 861 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 FUT10Q6P4F1 479 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 SCD5Q86SK9 330 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 ANKLE1Q8NAG6 615 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 RP9Q8TA86 221 aaKnown RBP16.35■□□□□ 0.21
CTCF-201ENST00000264010 ZSCAN18Q8TBC5 510 aaPredicted RBP16.35■□□□□ 0.21
CTCF-201ENST00000264010 CNDP1Q96KN2 507 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 TRPC7Q9HCX4 862 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 TMEM30AQ9NV96 361 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 TMEM88BA6NKF7 163 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 ADAMTS4O75173 837 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 SOAT2O75908 522 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 COL6A1P12109 1028 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 RAD51Q06609 339 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 TWF1Q12792 350 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 CARTPTQ16568 116 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 KCTD11Q693B1 232 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 FBXL22Q6P050 247 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 AAGABQ6PD74 315 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 ENDOVQ8N8Q3 282 aaKnown RBP16.35■□□□□ 0.21
CTCF-201ENST00000264010 OMA1Q96E52 524 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 ZNF778Q96MU6 729 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 CCDC28BQ9BUN5 200 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 CCDC106Q9BWC9 280 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 ALG9Q9H6U8 611 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 CATSPERZQ9NTU4 200 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 SLC30A1Q9Y6M5 507 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 SLC7A4O43246 635 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 OAZ2O95190 189 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 SLC10A7Q0GE19 358 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 HECTD2Q5U5R9 776 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 ANO7Q6IWH7 933 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 PYDC1Q8WXC3 89 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 FAM136AQ96C01 138 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 C1orf21Q9H246 121 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 ANGPTL3Q9Y5C1 460 aa16.35■□□□□ 0.21
CTCF-201ENST00000264010 GMPRP36959 345 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 SLC5A9Q2M3M2 681 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 ZRANB3Q5FWF4 1079 aa16.34■□□□□ 0.21
CTCF-201ENST00000264010 MS4A13Q5J8X5 152 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms