RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 PPARDQ03181 441 aa22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 DNAJC3Q13217 504 aa22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 MTSS1LQ765P7 747 aa22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 GLT6D1Q7Z4J2 308 aa22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 OR2A12Q8NGT7 310 aa22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 NXPE3Q969Y0 559 aa22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 DNAJC1Q96KC8 554 aaKnown RBP22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 FAM167BQ9BTA0 163 aa22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 KCNK9Q9NPC2 374 aa22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 PSD3Q9NYI0 1048 aa22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 GTSE1Q9NYZ3 720 aa22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 HACD3Q9P035 362 aa22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 CD207Q9UJ71 328 aa22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 SMG5Q9UPR3 1016 aaKnown RBP22.99■■□□□ 1.27
SMARCB1-201ENST00000263121 C5orf42Q9H799 3197 aa22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 MUC22E2RYF6 1773 aaPredicted RBP22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 TTC34A8MYJ7 566 aa22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 ARNTLO00327 626 aa22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 TYROBPO43914 113 aa22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 RFPL1O75677 317 aa22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 ITGA2BP08514 1039 aa22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 GDI1P31150 447 aa22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 GJA4P35212 333 aa22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 LIMK2P53671 638 aa22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 SLC18A1P54219 525 aa22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 EPHB1P54762 984 aa22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 SLC18A2Q05940 514 aa22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 GABPB1Q06547 395 aaPredicted RBP22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 THOC5Q13769 683 aaKnown RBP22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 GRM3Q14832 879 aa22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 EIF4HQ15056 248 aaKnown RBP22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 MROH9Q5TGP6 573 aa22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 NEPROQ6NW34 567 aa22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 MICALL1Q8N3F8 863 aa22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 SPOCK2Q92563 424 aa22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 HDAC10Q969S8 669 aa22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 ALKBH8Q96BT7 664 aaKnown RBP22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 ECHDC3Q96DC8 303 aa22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 TRMT61BQ9BVS5 477 aaKnown RBP22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 MFSD1Q9H3U5 465 aa22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 NLE1Q9NVX2 485 aaPredicted RBP22.98■■□□□ 1.27
SMARCB1-201ENST00000263121 A6NNZ2 444 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 SOX1O00570 391 aaPredicted RBP22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 BNIP3LO60238 219 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 SPAG7O75391 227 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 RPP40O75818 363 aaKnown RBP22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 BMP1P13497 986 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 SPRP35270 261 aaPredicted RBP22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 ABL2P42684 1182 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 KDSRQ06136 332 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 PTPRCAPQ14761 206 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 TUBB8Q3ZCM7 444 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 TTC30BQ8N4P2 665 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 BANPQ8N9N5 519 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 CHST14Q8NCH0 376 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 OR13C4Q8NGS5 318 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 CHFRQ96EP1 664 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 KLF6Q99612 283 aaPredicted RBP22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 MAGEE1Q9HCI5 957 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 FAM47DPA6NHR8 397 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 C2orf81A6NN90 581 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 TIMM44O43615 452 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 BUD23O43709 281 aaKnown RBP22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 CCNFP41002 786 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 EIF2DP41214 584 aaKnown RBP22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 RAD51Q06609 339 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 HTR4Q13639 388 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 PTPRRQ15256 657 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 MICALCLQ6ZW33 695 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 ZSWIM9Q86XI8 627 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 DENND6AQ8IWF6 608 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 TERB1Q8NA31 727 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 C2CD4AQ8NCU7 369 aaPredicted RBP22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 TTC8Q8TAM2 541 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 CALML6Q8TD86 181 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 PTPRN2Q92932 1015 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 CENPTQ96BT3 561 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 TBATAQ96M53 351 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 ZNF641Q96N77 438 aaPredicted RBP22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 SUV39H2Q9H5I1 410 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 ZDHHC6Q9H6R6 413 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 SLC8A2Q9UPR5 921 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 NUMBLQ9Y6R0 609 aa22.97■■□□□ 1.27
SMARCB1-201ENST00000263121 A0A0J9YYE9 177 aa22.96■■□□□ 1.27
SMARCB1-201ENST00000263121 ANHXE9PGG2 379 aa22.96■■□□□ 1.27
SMARCB1-201ENST00000263121 GOLGA8RI6L899 631 aa22.96■■□□□ 1.27
SMARCB1-201ENST00000263121 CCL22O00626 93 aa22.96■■□□□ 1.27
SMARCB1-201ENST00000263121 TRBC1P01850 177 aa22.96■■□□□ 1.27
SMARCB1-201ENST00000263121 F7P08709 466 aaPredicted RBP22.96■■□□□ 1.27
SMARCB1-201ENST00000263121 PYGBP11216 843 aa22.96■■□□□ 1.27
SMARCB1-201ENST00000263121 LPOP22079 712 aaPredicted RBP22.96■■□□□ 1.27
SMARCB1-201ENST00000263121 GABRB3P28472 473 aa22.96■■□□□ 1.27
SMARCB1-201ENST00000263121 SLC1A2P43004 574 aa22.96■■□□□ 1.27
SMARCB1-201ENST00000263121 RECQLP46063 649 aaPredicted RBP22.96■■□□□ 1.27
SMARCB1-201ENST00000263121 PRAMEP78395 509 aa22.96■■□□□ 1.27
SMARCB1-201ENST00000263121 NAIF1Q69YI7 327 aaPredicted RBP22.96■■□□□ 1.27
SMARCB1-201ENST00000263121 TTC19Q6DKK2 380 aaPredicted RBP22.96■■□□□ 1.27
SMARCB1-201ENST00000263121 ZNF470Q6ECI4 717 aa22.96■■□□□ 1.27
SMARCB1-201ENST00000263121 KIAA0408Q6ZU52 694 aa22.96■■□□□ 1.27
SMARCB1-201ENST00000263121 KDM1BQ8NB78 822 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms