RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 FBXO25Q8TCJ0 367 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 DQX1Q8TE96 717 aaKnown RBP13.48□□□□□ -0.25
SGCA-201ENST00000262018 DDI1Q8WTU0 396 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 P3H4Q92791 437 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 CCDC97Q96F63 343 aaPredicted RBP13.48□□□□□ -0.25
SGCA-201ENST00000262018 CSPG4P5Q96PW8 444 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 ARHGAP9Q9BRR9 750 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 SLC2A11Q9BYW1 496 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 MAGEB5Q9BZ81 275 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 PABPC3Q9H361 631 aaKnown RBP13.48□□□□□ -0.25
SGCA-201ENST00000262018 FAM204AQ9H8W3 233 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 ERVMER34-1Q9H9K5 563 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 PCDH9Q9HC56 1237 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 TMEM51Q9NW97 253 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 DDIT4Q9NX09 232 aa13.48□□□□□ -0.25
SGCA-201ENST00000262018 CWC15Q9P013 229 aaKnown RBP13.48□□□□□ -0.25
SGCA-201ENST00000262018 SAE1Q9UBE0 346 aaPredicted RBP13.48□□□□□ -0.25
SGCA-201ENST00000262018 MTRF1LQ9UGC7 380 aaKnown RBP13.48□□□□□ -0.25
SGCA-201ENST00000262018 SYNJ2BP-COX16A0A087WUM0 186 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 LRRC72A6NJI9 287 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 H3BRJ5 948 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 TP73O15350 636 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 PPFIA2O75334 1257 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 ADCY8P40145 1251 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 TRIP13Q15645 432 aaPredicted RBP13.47□□□□□ -0.25
SGCA-201ENST00000262018 C3orf38Q5JPI3 329 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 NPNTQ6UXI9 565 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 USP30Q70CQ3 517 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 TMC3Q7Z5M5 1100 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 SPATS2Q86XZ4 545 aaKnown RBP13.47□□□□□ -0.25
SGCA-201ENST00000262018 PYROXD2Q8N2H3 581 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 SERPINB11Q96P15 392 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 TMEM121Q9BTD3 319 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 OSBPL2Q9H1P3 480 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 COX16Q9P0S2 106 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 SERGEFQ9UGK8 458 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 HBS1LQ9Y450 684 aaKnown RBP13.47□□□□□ -0.25
SGCA-201ENST00000262018 SLC12A8A0AV02 714 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 A6NNZ2 444 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 NDC80O14777 642 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 RBP3P10745 1247 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 GOT1P17174 413 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 CR2P20023 1033 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 HCAR3P49019 387 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 ZNF135P52742 658 aaPredicted RBP13.47□□□□□ -0.25
SGCA-201ENST00000262018 ITGA8P53708 1063 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 ARL13BQ3SXY8 428 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 TUBB8Q3ZCM7 444 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 CHST9Q7L1S5 443 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 DENND1CQ8IV53 801 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 IQCKQ8N0W5 287 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 GLIS1Q8NBF1 620 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 OR2T34Q8NGX1 318 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 PLD4Q96BZ4 506 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 MTG2Q9H4K7 406 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 ANLNQ9NQW6 1124 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 TMPRSS4Q9NRS4 437 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 SUN2Q9UH99 717 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 SFMBT1Q9UHJ3 866 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 AGO1Q9UL18 857 aaKnown RBP13.47□□□□□ -0.25
SGCA-201ENST00000262018 SATB2Q9UPW6 733 aa13.47□□□□□ -0.25
SGCA-201ENST00000262018 TLN1Q9Y490 2541 aaKnown RBP13.46□□□□□ -0.25
SGCA-201ENST00000262018 A0A1B0GVM2 712 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 A0A1W2PP55 124 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 CFAP69A5D8W1 941 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 I6L893 689 aaPredicted RBP13.46□□□□□ -0.26
SGCA-201ENST00000262018 DNALI1O14645 258 aaPredicted RBP13.46□□□□□ -0.26
SGCA-201ENST00000262018 IRAK2O43187 625 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 ITGB6P18564 788 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 AMPD1P23109 780 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 STIP1P31948 543 aaKnown RBP13.46□□□□□ -0.26
SGCA-201ENST00000262018 HSD17B3P37058 310 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 NR2C2P49116 596 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 CCR5P51681 352 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 TLE1Q04724 770 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 DHX9Q08211 1270 aaKnown RBP13.46□□□□□ -0.26
SGCA-201ENST00000262018 SFSWAPQ12872 951 aaKnown RBP13.46□□□□□ -0.26
SGCA-201ENST00000262018 CLN3Q13286 438 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 XRCC4Q13426 336 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 TRIP4Q15650 581 aaPredicted RBP13.46□□□□□ -0.26
SGCA-201ENST00000262018 BRMS1LQ5PSV4 323 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 IZUMO3Q5VZ72 239 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 NCBP2-AS2Q69YL0 99 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 HIBCHQ6NVY1 386 aaPredicted RBP13.46□□□□□ -0.26
SGCA-201ENST00000262018 XKR5Q6UX68 686 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 PRUNE1Q86TP1 453 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 UNC45BQ8IWX7 931 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 WFIKKN2Q8TEU8 576 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 EXTL1Q92935 676 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 RTP4Q96DX8 246 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 SLC46A1Q96NT5 459 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 ABCG4Q9H172 646 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 WDCPQ9H6R7 721 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 ARHGEF38Q9NXL2 777 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 KCNK4Q9NYG8 393 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 ANAPC5Q9UJX4 755 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 SCML1Q9UN30 329 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 TLR6Q9Y2C9 796 aa13.46□□□□□ -0.26
SGCA-201ENST00000262018 CREBBPQ92793 2442 aa13.45□□□□□ -0.26
SGCA-201ENST00000262018 GOLGA6BA6NDN3 693 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms