RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 OR4Q2P0C623 313 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 MGAT1P26572 445 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 HNRNPH3P31942 346 aaKnown RBP13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 NOVP48745 357 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 RPS21P63220 83 aaKnown RBP13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 BEND5Q7L4P6 421 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 ADAMTS10Q9H324 1103 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 AGO3Q9H9G7 860 aaKnown RBP13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 CYP11A1P05108 521 aa13.46□□□□□ -0.25
PRPF38A-201ENST00000257181 MC4RP32245 332 aa13.46□□□□□ -0.25
PRPF38A-201ENST00000257181 C1orf74Q96LT6 269 aa13.46□□□□□ -0.25
PRPF38A-201ENST00000257181 GBA3Q9H227 469 aa13.46□□□□□ -0.25
PRPF38A-201ENST00000257181 COPS7AQ9UBW8 275 aa13.46□□□□□ -0.25
PRPF38A-201ENST00000257181 ZNF487B1APH4 448 aa13.46□□□□□ -0.25
PRPF38A-201ENST00000257181 CD3EAPO15446 510 aaKnown RBP13.46□□□□□ -0.25
PRPF38A-201ENST00000257181 GSNP06396 782 aa13.46□□□□□ -0.25
PRPF38A-201ENST00000257181 TIE1P35590 1138 aa13.46□□□□□ -0.25
PRPF38A-201ENST00000257181 DLG2Q15700 870 aa13.46□□□□□ -0.25
PRPF38A-201ENST00000257181 CYP51A1Q16850 503 aa13.46□□□□□ -0.25
PRPF38A-201ENST00000257181 CST9Q5W186 159 aa13.46□□□□□ -0.25
PRPF38A-201ENST00000257181 MARK2Q7KZI7 788 aaKnown RBP13.46□□□□□ -0.25
PRPF38A-201ENST00000257181 TAC4Q86UU9 113 aa13.46□□□□□ -0.25
PRPF38A-201ENST00000257181 C17orf53Q8N3J3 647 aaPredicted RBP13.46□□□□□ -0.25
PRPF38A-201ENST00000257181 LCN9Q8WX39 176 aa13.46□□□□□ -0.25
PRPF38A-201ENST00000257181 C9orf72Q96LT7 481 aa13.46□□□□□ -0.25
PRPF38A-201ENST00000257181 GOLGA2P5Q9HBQ8 144 aa13.46□□□□□ -0.25
PRPF38A-201ENST00000257181 INTS10Q9NVR2 710 aaKnown RBP13.46□□□□□ -0.25
PRPF38A-201ENST00000257181 WNT3AP56704 352 aa13.46□□□□□ -0.26
PRPF38A-201ENST00000257181 PTPN21Q16825 1174 aa13.46□□□□□ -0.26
PRPF38A-201ENST00000257181 FSTL5Q8N475 847 aaPredicted RBP13.46□□□□□ -0.26
PRPF38A-201ENST00000257181 QKIQ96PU8 341 aaKnown RBP eCLIP13.46□□□□□ -0.263e-7■■■■■ 29.8
PRPF38A-201ENST00000257181 SUV39H2Q9H5I1 410 aa13.46□□□□□ -0.26
PRPF38A-201ENST00000257181 MINDY3Q9H8M7 445 aa13.46□□□□□ -0.26
PRPF38A-201ENST00000257181 RBM12Q9NTZ6 932 aaKnown RBP13.46□□□□□ -0.26
PRPF38A-201ENST00000257181 ABCB8Q9NUT2 735 aa13.46□□□□□ -0.26
PRPF38A-201ENST00000257181 ARHGAP20Q9P2F6 1191 aa13.46□□□□□ -0.26
PRPF38A-201ENST00000257181 ABHD2P08910 425 aa13.46□□□□□ -0.26
PRPF38A-201ENST00000257181 LRRC14Q15048 493 aa13.46□□□□□ -0.26
PRPF38A-201ENST00000257181 HIBCHQ6NVY1 386 aaPredicted RBP13.46□□□□□ -0.26
PRPF38A-201ENST00000257181 CMTM8Q8IZV2 173 aa13.46□□□□□ -0.26
PRPF38A-201ENST00000257181 ZBTB2Q8N680 514 aa13.46□□□□□ -0.26
PRPF38A-201ENST00000257181 CEP76Q8TAP6 659 aa13.46□□□□□ -0.26
PRPF38A-201ENST00000257181 ANKRD7Q92527 254 aa13.46□□□□□ -0.26
PRPF38A-201ENST00000257181 TRPS1Q9UHF7 1281 aa13.46□□□□□ -0.26
PRPF38A-201ENST00000257181 AP2A2O94973 939 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 HIST1H2ABP04908 130 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 NSG1P42857 185 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 CASP5P51878 434 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 NUP107P57740 925 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 CUL3Q13618 768 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 NR6A1Q15406 480 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 PDSS1Q5T2R2 415 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 SNX30Q5VWJ9 437 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 HIST3H2AQ7L7L0 130 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 ANKRD33Q7Z3H0 272 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 AMIGO3Q86WK7 504 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 RALGPS2Q86X27 583 aaPredicted RBP13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 RBM12BQ8IXT5 1001 aaKnown RBP13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 HIST1H2ACQ93077 130 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 MRPL38Q96DV4 380 aaKnown RBP13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 CHAMP1Q96JM3 812 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 PAFAH2Q99487 392 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 CDHR5Q9HBB8 845 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 NUDT5Q9UKK9 219 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 PIRO00625 290 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 PKMP14618 531 aaKnown RBP13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 ITIH4Q14624 930 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 RASA2Q15283 850 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 UPP1Q16831 310 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 ACOX2Q99424 681 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 SRMSQ9H3Y6 488 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 PRDM12Q9H4Q4 367 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 ITM2CQ9NQX7 267 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 NUDT4Q9NZJ9 180 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 BAIAP2L1Q9UHR4 511 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 CCDC88AQ3V6T2 1871 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 DLG5Q8TDM6 1919 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 RNF103-CHMP3A0A140T963 221 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 UPK3BL1B0FP48 263 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 UPK3BL2E5RIL1 263 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 E2F3O00716 465 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 SOCS5O75159 536 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 OAZ2O95190 189 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 SERPINE1P05121 402 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 DLDP09622 509 aaKnown RBP13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 CBSLP0DN79 551 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 RBL1P28749 1068 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 CBSP35520 551 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 SPATA21Q7Z572 469 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 ALLCQ8N6M5 410 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 KCNV2Q8TDN2 545 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 SETD7Q8WTS6 366 aaKnown RBP13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 OSBPL6Q9BZF3 934 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 SPATS2LQ9NUQ6 558 aaKnown RBP13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 EXD2Q9NVH0 621 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 hCG_1818297A0A087WSY0 165 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 FAM221BA6H8Z2 402 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 LRRC14BA6NHZ5 514 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 KMOO15229 486 aa13.45□□□□□ -0.26
PRPF38A-201ENST00000257181 TRIM13O60858 407 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms