RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 NEPROQ6NW34 567 aa18.99■□□□□ 0.63
TRIM47-201ENST00000254816 ZC3HC1Q86WB0 502 aaKnown RBP18.99■□□□□ 0.63
TRIM47-201ENST00000254816 MDGA1Q8NFP4 955 aa18.99■□□□□ 0.63
TRIM47-201ENST00000254816 OR6P1Q8NGX9 317 aa18.99■□□□□ 0.63
TRIM47-201ENST00000254816 TBATAQ96M53 351 aa18.99■□□□□ 0.63
TRIM47-201ENST00000254816 TRIM33Q9UPN9 1127 aa18.99■□□□□ 0.63
TRIM47-201ENST00000254816 PLLPQ9Y342 182 aa18.99■□□□□ 0.63
TRIM47-201ENST00000254816 ZNF821O75541 412 aaPredicted RBP18.98■□□□□ 0.63
TRIM47-201ENST00000254816 PAPSS2O95340 614 aaPredicted RBP18.98■□□□□ 0.63
TRIM47-201ENST00000254816 SP100P23497 879 aaPredicted RBP18.98■□□□□ 0.63
TRIM47-201ENST00000254816 PLK1P53350 603 aa18.98■□□□□ 0.63
TRIM47-201ENST00000254816 DGKKQ5KSL6 1271 aa18.98■□□□□ 0.63
TRIM47-201ENST00000254816 C16orf46Q6P387 395 aa18.98■□□□□ 0.63
TRIM47-201ENST00000254816 LDB1Q86U70 411 aaPredicted RBP18.98■□□□□ 0.63
TRIM47-201ENST00000254816 CAMK1DQ8IU85 385 aa18.98■□□□□ 0.63
TRIM47-201ENST00000254816 CELF5Q8N6W0 485 aaKnown RBP18.98■□□□□ 0.63
TRIM47-201ENST00000254816 ARMC2Q8NEN0 867 aa18.98■□□□□ 0.63
TRIM47-201ENST00000254816 VPS11Q9H270 941 aa18.98■□□□□ 0.63
TRIM47-201ENST00000254816 FBXO6Q9NRD1 293 aaPredicted RBP18.98■□□□□ 0.63
TRIM47-201ENST00000254816 NSMCE4AQ9NXX6 385 aa18.98■□□□□ 0.63
TRIM47-201ENST00000254816 ARIH1Q9Y4X5 557 aaPredicted RBP18.98■□□□□ 0.63
TRIM47-201ENST00000254816 HAUS5O94927 633 aa18.98■□□□□ 0.63
TRIM47-201ENST00000254816 PIGNO95427 931 aa18.98■□□□□ 0.63
TRIM47-201ENST00000254816 GLP2RO95838 553 aa18.98■□□□□ 0.63
TRIM47-201ENST00000254816 SRCP12931 536 aa18.98■□□□□ 0.63
TRIM47-201ENST00000254816 IRX4P78413 519 aa18.98■□□□□ 0.63
TRIM47-201ENST00000254816 BNIP1Q12981 228 aa18.98■□□□□ 0.63
TRIM47-201ENST00000254816 ZNF789Q5FWF6 425 aa18.98■□□□□ 0.63
TRIM47-201ENST00000254816 TCEAL5Q5H9L2 206 aa18.98■□□□□ 0.63
TRIM47-201ENST00000254816 NPAS3Q8IXF0 933 aa18.98■□□□□ 0.63
TRIM47-201ENST00000254816 KIF2BQ8N4N8 673 aa18.98■□□□□ 0.63
TRIM47-201ENST00000254816 C2CD4AQ8NCU7 369 aaPredicted RBP18.98■□□□□ 0.63
TRIM47-201ENST00000254816 GRAMD1AQ96CP6 724 aa18.98■□□□□ 0.63
TRIM47-201ENST00000254816 SLC39A10Q9ULF5 831 aa18.98■□□□□ 0.63
TRIM47-201ENST00000254816 STARD13Q9Y3M8 1113 aa18.98■□□□□ 0.63
TRIM47-201ENST00000254816 PCDHB9Q9Y5E1 797 aa18.98■□□□□ 0.63
TRIM47-201ENST00000254816 ANKRD66B4E2M5 251 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 TIMM44O43615 452 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 BNIP3LO60238 219 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 EDF1O60869 148 aaKnown RBP18.97■□□□□ 0.63
TRIM47-201ENST00000254816 DHRS4L1P0CG22 281 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 WEE1P30291 646 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 CRHR1P34998 444 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 ABL2P42684 1182 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 PRAMEP78395 509 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 SNCBQ16143 134 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 FAM78AQ5JUQ0 283 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 GET4Q7L5D6 327 aaPredicted RBP18.97■□□□□ 0.63
TRIM47-201ENST00000254816 GLT6D1Q7Z4J2 308 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 RYBPQ8N488 228 aaPredicted RBP18.97■□□□□ 0.63
TRIM47-201ENST00000254816 EFHBQ8N7U6 833 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 PLCD4Q9BRC7 762 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 MECRQ9BV79 373 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 RHOJQ9H4E5 214 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 ZNF358Q9NW07 568 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 MKS1Q9NXB0 559 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 ZMYM5Q9UJ78 669 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 FBXO5Q9UKT4 447 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 XIRP2A4UGR9 3374 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 SIN3BO75182 1162 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 PABPC1P11940 636 aaKnown RBP18.97■□□□□ 0.63
TRIM47-201ENST00000254816 TCF3P15923 654 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 SERPINB8P50452 374 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 IRF9Q00978 393 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 SLC12A1Q13621 1099 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 RGS9BPQ6ZS82 235 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 NLRP9Q7RTR0 991 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 MFSD6LQ8IWD5 586 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 ACMSDQ8TDX5 336 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 ZNF75CPQ92670 426 aaPredicted RBP18.97■□□□□ 0.63
TRIM47-201ENST00000254816 FGF13Q92913 245 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 ASIC4Q96FT7 647 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 ZFYVE19Q96K21 471 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 FAM167BQ9BTA0 163 aa18.97■□□□□ 0.63
TRIM47-201ENST00000254816 DUS2Q9NX74 493 aaKnown RBP18.97■□□□□ 0.63
TRIM47-201ENST00000254816 MARCH4Q9P2E8 410 aaPredicted RBP18.97■□□□□ 0.63
TRIM47-201ENST00000254816 FSHRP23945 695 aa18.96■□□□□ 0.63
TRIM47-201ENST00000254816 CNSTQ6PJW8 725 aa18.96■□□□□ 0.63
TRIM47-201ENST00000254816 SLC41A1Q8IVJ1 513 aa18.96■□□□□ 0.63
TRIM47-201ENST00000254816 SPNS2Q8IVW8 549 aa18.96■□□□□ 0.63
TRIM47-201ENST00000254816 GBP7Q8N8V2 638 aaPredicted RBP18.96■□□□□ 0.63
TRIM47-201ENST00000254816 GPR22Q99680 433 aa18.96■□□□□ 0.63
TRIM47-201ENST00000254816 ADGRE3Q9BY15 652 aa18.96■□□□□ 0.63
TRIM47-201ENST00000254816 MGRN1O60291 552 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 GOT2P00505 430 aaKnown RBP18.95■□□□□ 0.62
TRIM47-201ENST00000254816 CTPS1P17812 591 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 MAGEA12P43365 314 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 SERPINB4P48594 390 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 DHCR24Q15392 516 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 ACCSLQ4AC99 568 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 N4BP2L1Q5TBK1 243 aaPredicted RBP18.95■□□□□ 0.62
TRIM47-201ENST00000254816 ARMC3Q5W041 872 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 TMEM215Q68D42 235 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 PLD6Q8N2A8 252 aaKnown RBP18.95■□□□□ 0.62
TRIM47-201ENST00000254816 OR4K2Q8NGD2 314 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 ISL2Q96A47 359 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 MRPL38Q96DV4 380 aaKnown RBP18.95■□□□□ 0.62
TRIM47-201ENST00000254816 MYLK2Q9H1R3 596 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 SLCO3A1Q9UIG8 710 aa18.95■□□□□ 0.62
TRIM47-201ENST00000254816 EMCNQ9ULC0 261 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms