RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 RRN3P2A6NIE6 340 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 M0R3G1 203 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 NTRK1P04629 796 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 CDH3P22223 829 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 LMO2P25791 158 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 SLC26A3P40879 764 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 RHDQ02161 417 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 PRKCQQ04759 706 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 MOGQ16653 247 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 AGKQ53H12 422 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 TTC7BQ86TV6 843 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 MIER2Q8N344 545 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 SMYD1Q8NB12 490 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 CYGBQ8WWM9 190 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 ATP6V1E2Q96A05 226 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 CEP44Q9C0F1 390 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 CCNB1IP1Q9NPC3 277 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 FAIMQ9NVQ4 179 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 COMMD8Q9NX08 183 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 ANAPC2Q9UJX6 822 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 ATP11BQ9Y2G3 1177 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 MICAL3Q7RTP6 2002 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 TBKBP1A7MCY6 615 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 FAM72CH0Y354 149 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 GFRA2O00451 464 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 PYGLP06737 847 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 SAT1P21673 171 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 DNAJB13P59910 316 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 TXNL4AP83876 142 aaKnown RBP4.17□□□□□ -1.74
UBE4A-201ENST00000252108 CHRNB3Q05901 458 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 FXNQ16595 210 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 C5orf22Q49AR2 442 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 FAM98BQ52LJ0 330 aaKnown RBP4.17□□□□□ -1.74
UBE4A-201ENST00000252108 SFT2D3Q587I9 215 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 FAM72AQ5TYM5 149 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 FAM72DQ6L9T8 149 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 UGT2A3Q6UWM9 527 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 GPRIN1Q7Z2K8 1008 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 SPATA19Q7Z5L4 167 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 GALNT7Q86SF2 657 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 ADCK1Q86TW2 530 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 FAM72BQ86X60 149 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 HPS6Q86YV9 775 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 DCLK2Q8N568 766 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 ACVR1CQ8NER5 493 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 DQX1Q8TE96 717 aaKnown RBP4.17□□□□□ -1.74
UBE4A-201ENST00000252108 C18orf25Q96B23 403 aaPredicted RBP4.17□□□□□ -1.74
UBE4A-201ENST00000252108 RCN3Q96D15 328 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 CENPNQ96H22 339 aaPredicted RBP4.17□□□□□ -1.74
UBE4A-201ENST00000252108 B3GNT5Q9BYG0 378 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 SARDHQ9UL12 918 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 AURKCQ9UQB9 309 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 NEUROG3Q9Y4Z2 214 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 SMIM28A0A1B0GU29 152 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 PNMA8CA0A1B0GUJ8 204 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 WASH4PA8MWX3 477 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 RNASEH1O60930 286 aaKnown RBP4.17□□□□□ -1.74
UBE4A-201ENST00000252108 TULP3O75386 442 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 VNN2O95498 520 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 AP2A1O95782 977 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 RPLP2P05387 115 aaKnown RBP4.17□□□□□ -1.74
UBE4A-201ENST00000252108 ZFP36L2P47974 494 aaKnown RBP4.17□□□□□ -1.74
UBE4A-201ENST00000252108 GRIA4P48058 902 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 RAB10P61026 200 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 PRAMEP78395 509 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 GALNT2Q10471 571 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 MAD2L1Q13257 205 aaPredicted RBP4.17□□□□□ -1.74
UBE4A-201ENST00000252108 CCNIQ14094 377 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 DGKDQ16760 1214 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 COQ5Q5HYK3 327 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 ALG1LQ6GMV1 187 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 NIPAL1Q6NVV3 410 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 ZCCHC23Q6ZST2 131 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 CLEC20AQ6ZU45 233 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 ZNF598Q86UK7 904 aaKnown RBP4.17□□□□□ -1.74
UBE4A-201ENST00000252108 LSMEM2Q8N112 164 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 ATPAF2Q8N5M1 289 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 SCAIQ8N9R8 606 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 APPL2Q8NEU8 664 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 GIPC3Q8TF64 312 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 CPB2Q96IY4 423 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 MECRQ9BV79 373 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 ASPSCR1Q9BZE9 553 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 RNF39Q9H2S5 420 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 IGFLR1Q9H665 355 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 NOL6Q9H6R4 1146 aaKnown RBP4.17□□□□□ -1.74
UBE4A-201ENST00000252108 SLC38A7Q9NVC3 462 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 SETD4Q9NVD3 440 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 PNPOQ9NVS9 261 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 TPRKBQ9Y3C4 175 aa4.17□□□□□ -1.74
UBE4A-201ENST00000252108 hCG_2014768A0A024R1R8 64 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 SAGE2PA6NJ88 616 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 M0QZQ0 153 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 PHGDHO43175 533 aaKnown RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 ITM2AO43736 263 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 NRP2O60462 931 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 B4GALT3O60512 393 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 CNOT3O75175 753 aaKnown RBP4.16□□□□□ -1.74
UBE4A-201ENST00000252108 SOAT2O75908 522 aa4.16□□□□□ -1.74
UBE4A-201ENST00000252108 NPPAP01160 153 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms