RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 USP33Q8TEY7 942 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 KCTD4Q8WVF5 259 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 SCYL1Q96KG9 808 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 COX4I2Q96KJ9 171 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 PFDN4Q9NQP4 134 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 CHST12Q9NRB3 414 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 IARS2Q9NSE4 1012 aaKnown RBP19.04■□□□□ 0.64
SNX4-201ENST00000251775 TBC1D23Q9NUY8 699 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 ANKRD6Q9Y2G4 727 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 GIT1Q9Y2X7 761 aa19.04■□□□□ 0.64
SNX4-201ENST00000251775 TDRD15B5MCY1 1934 aaKnown RBP19.03■□□□□ 0.64
SNX4-201ENST00000251775 GOLGA8TH3BQL2 631 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 HDCP19113 662 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 SAT1P21673 171 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 HMOX2P30519 316 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 RPL9P32969 192 aaKnown RBP19.03■□□□□ 0.64
SNX4-201ENST00000251775 PRKCQQ04759 706 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 REP15Q6BDI9 236 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 FAM171BQ6P995 826 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 ARHGAP36Q6ZRI8 547 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 OTOP3Q7RTS5 596 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 FSTL5Q8N475 847 aaPredicted RBP19.03■□□□□ 0.64
SNX4-201ENST00000251775 FAM110BQ8TC76 370 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 DQX1Q8TE96 717 aaKnown RBP19.03■□□□□ 0.64
SNX4-201ENST00000251775 TMEM209Q96SK2 561 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 VAT1Q99536 393 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 PAIP1Q9H074 479 aaKnown RBP19.03■□□□□ 0.64
SNX4-201ENST00000251775 CD300AQ9UGN4 299 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 TLK1Q9UKI8 766 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 RUVBL2Q9Y230 463 aaKnown RBP19.03■□□□□ 0.64
SNX4-201ENST00000251775 DNAH12Q6ZR08 3092 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 CCDC78A2IDD5 438 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 AKAP10O43572 662 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 AKR1A1P14550 325 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 ARSAP15289 507 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 RELAQ04206 551 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 DCLRE1AQ6PJP8 1040 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 ZNF786Q8N393 782 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 RNF34Q969K3 372 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 PPWD1Q96BP3 646 aaKnown RBP19.03■□□□□ 0.64
SNX4-201ENST00000251775 GPR22Q99680 433 aa19.03■□□□□ 0.64
SNX4-201ENST00000251775 DLGAP1O14490 977 aa19.02■□□□□ 0.64
SNX4-201ENST00000251775 POMCP01189 267 aa19.02■□□□□ 0.64
SNX4-201ENST00000251775 FUT4P22083 530 aa19.02■□□□□ 0.64
SNX4-201ENST00000251775 ACADVLP49748 655 aa19.02■□□□□ 0.64
SNX4-201ENST00000251775 C17orf99Q6UX52 265 aa19.02■□□□□ 0.64
SNX4-201ENST00000251775 LRRTM3Q86VH5 581 aa19.02■□□□□ 0.64
SNX4-201ENST00000251775 CENPLQ8N0S6 344 aaPredicted RBP19.02■□□□□ 0.64
SNX4-201ENST00000251775 HASPINQ8TF76 798 aa19.02■□□□□ 0.64
SNX4-201ENST00000251775 MTG1Q9BT17 334 aaPredicted RBP19.02■□□□□ 0.64
SNX4-201ENST00000251775 TRPC7Q9HCX4 862 aa19.02■□□□□ 0.64
SNX4-201ENST00000251775 PTBP2Q9UKA9 531 aaKnown RBP19.02■□□□□ 0.64
SNX4-201ENST00000251775 NEU3Q9UQ49 428 aa19.02■□□□□ 0.64
SNX4-201ENST00000251775 WDR37Q9Y2I8 494 aa19.02■□□□□ 0.64
SNX4-201ENST00000251775 PTPRDP23468 1912 aa19.02■□□□□ 0.64
SNX4-201ENST00000251775 MAGEB16A2A368 324 aa19.02■□□□□ 0.63
SNX4-201ENST00000251775 B3GAT3O94766 335 aa19.02■□□□□ 0.63
SNX4-201ENST00000251775 SLC35E2BP0CK96 405 aa19.02■□□□□ 0.63
SNX4-201ENST00000251775 BMP2P12643 396 aa19.02■□□□□ 0.63
SNX4-201ENST00000251775 AVPR1AP37288 418 aa19.02■□□□□ 0.63
SNX4-201ENST00000251775 ZNF135P52742 658 aaPredicted RBP19.02■□□□□ 0.63
SNX4-201ENST00000251775 STX5Q13190 355 aa19.02■□□□□ 0.63
SNX4-201ENST00000251775 ZNF829Q3KNS6 432 aaPredicted RBP19.02■□□□□ 0.63
SNX4-201ENST00000251775 TSTD2Q5T7W7 516 aa19.02■□□□□ 0.63
SNX4-201ENST00000251775 CST9Q5W186 159 aa19.02■□□□□ 0.63
SNX4-201ENST00000251775 CD300LGQ6UXG3 332 aa19.02■□□□□ 0.63
SNX4-201ENST00000251775 NCCRP1Q6ZVX7 275 aaPredicted RBP19.02■□□□□ 0.63
SNX4-201ENST00000251775 SCAMP5Q8TAC9 235 aa19.02■□□□□ 0.63
SNX4-201ENST00000251775 BORCS5Q969J3 196 aa19.02■□□□□ 0.63
SNX4-201ENST00000251775 NPLQ9BXD5 320 aaPredicted RBP19.02■□□□□ 0.63
SNX4-201ENST00000251775 SIK2Q9H0K1 926 aa19.02■□□□□ 0.63
SNX4-201ENST00000251775 RPF2Q9H7B2 306 aaKnown RBP19.02■□□□□ 0.63
SNX4-201ENST00000251775 SPAG4Q9NPE6 437 aa19.02■□□□□ 0.63
SNX4-201ENST00000251775 SMOXQ9NWM0 555 aa19.02■□□□□ 0.63
SNX4-201ENST00000251775 XPR1Q9UBH6 696 aa19.02■□□□□ 0.63
SNX4-201ENST00000251775 NLRC5Q86WI3 1866 aa19.01■□□□□ 0.63
SNX4-201ENST00000251775 TRIM64A6NGJ6 449 aa19.01■□□□□ 0.63
SNX4-201ENST00000251775 ZNF839A8K0R7 811 aa19.01■□□□□ 0.63
SNX4-201ENST00000251775 H3BMQ9 156 aa19.01■□□□□ 0.63
SNX4-201ENST00000251775 MGEA5O60502 916 aa19.01■□□□□ 0.63
SNX4-201ENST00000251775 DUSP11O75319 330 aaKnown RBP19.01■□□□□ 0.63
SNX4-201ENST00000251775 SERPINB7O75635 380 aa19.01■□□□□ 0.63
SNX4-201ENST00000251775 ODC1P11926 461 aa19.01■□□□□ 0.63
SNX4-201ENST00000251775 COL6A2P12110 1019 aa19.01■□□□□ 0.63
SNX4-201ENST00000251775 IDO1P14902 403 aa19.01■□□□□ 0.63
SNX4-201ENST00000251775 LRRC8EQ6NSJ5 796 aa19.01■□□□□ 0.63
SNX4-201ENST00000251775 TTC33Q6PID6 262 aaPredicted RBP19.01■□□□□ 0.63
SNX4-201ENST00000251775 MRPL10Q7Z7H8 261 aaKnown RBP19.01■□□□□ 0.63
SNX4-201ENST00000251775 CCNYL1Q8N7R7 359 aa19.01■□□□□ 0.63
SNX4-201ENST00000251775 OR10T2Q8NGX3 314 aa19.01■□□□□ 0.63
SNX4-201ENST00000251775 SPATA22Q8NHS9 363 aa19.01■□□□□ 0.63
SNX4-201ENST00000251775 TBC1D15Q8TC07 691 aa19.01■□□□□ 0.63
SNX4-201ENST00000251775 PBXIP1Q96AQ6 731 aa19.01■□□□□ 0.63
SNX4-201ENST00000251775 COG8Q96MW5 612 aa19.01■□□□□ 0.63
SNX4-201ENST00000251775 TSNARE1Q96NA8 513 aa19.01■□□□□ 0.63
SNX4-201ENST00000251775 PKMYT1Q99640 499 aa19.01■□□□□ 0.63
SNX4-201ENST00000251775 ACBD6Q9BR61 282 aa19.01■□□□□ 0.63
SNX4-201ENST00000251775 EFHD1Q9BUP0 239 aa19.01■□□□□ 0.63
SNX4-201ENST00000251775 TTC3P53804 2025 aa19.01■□□□□ 0.63
SNX4-201ENST00000251775 MYLKQ15746 1914 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms