RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 CHERPQ8IWX8 916 aaKnown RBP17.08■□□□□ 0.33
FOXA1-201ENST00000250448 STYXQ8WUJ0 223 aa17.08■□□□□ 0.33
FOXA1-201ENST00000250448 KCTD4Q8WVF5 259 aa17.08■□□□□ 0.33
FOXA1-201ENST00000250448 NT5C3BQ969T7 300 aa17.08■□□□□ 0.33
FOXA1-201ENST00000250448 APOL2Q9BQE5 337 aa17.08■□□□□ 0.33
FOXA1-201ENST00000250448 VN1R3Q9BXE9 311 aa17.08■□□□□ 0.33
FOXA1-201ENST00000250448 MRPL9Q9BYD2 267 aaKnown RBP17.08■□□□□ 0.33
FOXA1-201ENST00000250448 GBA3Q9H227 469 aa17.08■□□□□ 0.33
FOXA1-201ENST00000250448 TIMMDC1Q9NPL8 285 aa17.08■□□□□ 0.33
FOXA1-201ENST00000250448 CHRAC1Q9NRG0 131 aa17.08■□□□□ 0.33
FOXA1-201ENST00000250448 THEGQ9P2T0 379 aa17.08■□□□□ 0.33
FOXA1-201ENST00000250448 ERI2A8K979 691 aaKnown RBP17.08■□□□□ 0.32
FOXA1-201ENST00000250448 GOLGA8TH3BQL2 631 aa17.08■□□□□ 0.32
FOXA1-201ENST00000250448 SYN3O14994 580 aa17.08■□□□□ 0.32
FOXA1-201ENST00000250448 ZBTB24O43167 697 aaPredicted RBP17.08■□□□□ 0.32
FOXA1-201ENST00000250448 ZNF189O75820 626 aaPredicted RBP17.08■□□□□ 0.32
FOXA1-201ENST00000250448 HSPA1AP0DMV8 641 aaKnown RBP17.08■□□□□ 0.32
FOXA1-201ENST00000250448 HSPA1BP0DMV9 641 aaKnown RBP17.08■□□□□ 0.32
FOXA1-201ENST00000250448 PSMC3P17980 439 aa17.08■□□□□ 0.32
FOXA1-201ENST00000250448 FGFR3P22607 806 aa17.08■□□□□ 0.32
FOXA1-201ENST00000250448 PTK2BQ14289 1009 aa17.08■□□□□ 0.32
FOXA1-201ENST00000250448 MYBPC3Q14896 1274 aa17.08■□□□□ 0.32
FOXA1-201ENST00000250448 ZNF280DQ6N043 979 aa17.08■□□□□ 0.32
FOXA1-201ENST00000250448 KLC3Q6P597 504 aa17.08■□□□□ 0.32
FOXA1-201ENST00000250448 GET4Q7L5D6 327 aaPredicted RBP17.08■□□□□ 0.32
FOXA1-201ENST00000250448 DCP1BQ8IZD4 617 aaKnown RBP17.08■□□□□ 0.32
FOXA1-201ENST00000250448 FAM156AQ8NDB6 213 aa17.08■□□□□ 0.32
FOXA1-201ENST00000250448 CHCHD3Q9NX63 227 aaKnown RBP17.08■□□□□ 0.32
FOXA1-201ENST00000250448 LMCD1Q9NZU5 365 aa17.08■□□□□ 0.32
FOXA1-201ENST00000250448 FAM72CH0Y354 149 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 TNFRSF10BO14763 440 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 TCN1P20061 433 aaPredicted RBP17.07■□□□□ 0.32
FOXA1-201ENST00000250448 NPY2RP49146 381 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 PGGT1BP53609 377 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 USP10Q14694 798 aaKnown RBP17.07■□□□□ 0.32
FOXA1-201ENST00000250448 FAM72AQ5TYM5 149 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 FAM72DQ6L9T8 149 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 ZC3HC1Q86WB0 502 aaKnown RBP17.07■□□□□ 0.32
FOXA1-201ENST00000250448 FAM72BQ86X60 149 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 SEPT5Q99719 369 aaPredicted RBP17.07■□□□□ 0.32
FOXA1-201ENST00000250448 RHOJQ9H4E5 214 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 CWH43Q9H720 699 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 NMUR1Q9HB89 426 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 MAGEB16A2A368 324 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 MSI1O43347 362 aaKnown RBP17.07■□□□□ 0.32
FOXA1-201ENST00000250448 ZNF26P17031 533 aaPredicted RBP17.07■□□□□ 0.32
FOXA1-201ENST00000250448 ERCC2P18074 760 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 NMBRP28336 390 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 PCSK6P29122 969 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 SLC5A2P31639 672 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 CD68P34810 354 aaPredicted RBP17.07■□□□□ 0.32
FOXA1-201ENST00000250448 AVPR1AP37288 418 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 MRPL58Q14197 206 aaKnown RBP17.07■□□□□ 0.32
FOXA1-201ENST00000250448 MGAT5BQ3V5L5 792 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 IL23RQ5VWK5 629 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 LRRC8EQ6NSJ5 796 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 PDZD4Q76G19 769 aaPredicted RBP17.07■□□□□ 0.32
FOXA1-201ENST00000250448 BNIPLQ7Z465 357 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 TAC4Q86UU9 113 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 EME1Q96AY2 570 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 WDR6Q9NNW5 1121 aaKnown RBP17.07■□□□□ 0.32
FOXA1-201ENST00000250448 EPS15L1Q9UBC2 864 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 CIDEBQ9UHD4 219 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 SFMBT1Q9UHJ3 866 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 BLOC1S6Q9UL45 172 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 RUVBL2Q9Y230 463 aaKnown RBP17.07■□□□□ 0.32
FOXA1-201ENST00000250448 AK5Q9Y6K8 562 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 A0A1B0GTW7 788 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 VNN2O95498 520 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 SLC35E2BP0CK96 405 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 CDK4P11802 303 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 MAGEA8P43361 318 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 PPIDQ08752 370 aaKnown RBP17.07■□□□□ 0.32
FOXA1-201ENST00000250448 PM20D1Q6GTS8 502 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 NECAB2Q7Z6G3 386 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 FSTL5Q8N475 847 aaPredicted RBP17.07■□□□□ 0.32
FOXA1-201ENST00000250448 ATP6V1E2Q96A05 226 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 NSMCE4AQ9NXX6 385 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 ADA2Q9NZK5 511 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 XPR1Q9UBH6 696 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 PCDHB5Q9Y5E4 795 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 CEPT1Q9Y6K0 416 aa17.07■□□□□ 0.32
FOXA1-201ENST00000250448 DLX3O60479 287 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 TIMP1P01033 207 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 TPH1P17752 444 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 NFKB1P19838 968 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 SLC12A1Q13621 1099 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 GK5Q6ZS86 529 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 SCD5Q86SK9 330 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 CENPLQ8N0S6 344 aaPredicted RBP17.06■□□□□ 0.32
FOXA1-201ENST00000250448 ASB9Q96DX5 294 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 HAUS8Q9BT25 410 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 TTPALQ9BTX7 342 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 OSER1Q9NX31 292 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 SUCOQ9UBS9 1254 aaKnown RBP17.06■□□□□ 0.32
FOXA1-201ENST00000250448 CDH23Q9H251 3354 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 A0A1W2PQH9 124 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 TMEM233B4DJY2 109 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 TARM1B6A8C7 271 aa17.06■□□□□ 0.32
FOXA1-201ENST00000250448 CSPG5O95196 566 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms