RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 TNFRSF12AQ9NP84 129 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 IGSF5Q9NSI5 407 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 CLIC5Q9NZA1 410 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 SORCS3Q9UPU3 1222 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 PATJQ8NI35 1801 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 SLC38A8A6NNN8 435 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 F5H5T6 163 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 FGFR3P22607 806 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 CRABP2P29373 138 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 NRG1Q02297 640 aaPredicted RBP15.84■□□□□ 0.13
LRFN1-201ENST00000248668 TBL3Q12788 808 aaKnown RBP15.84■□□□□ 0.13
LRFN1-201ENST00000248668 CILP2Q8IUL8 1156 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 LRRC49Q8IUZ0 686 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 FAM96AQ9H5X1 160 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 SMPD4Q9NXE4 827 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 ZFP37Q9Y6Q3 630 aaPredicted RBP15.84■□□□□ 0.13
LRFN1-201ENST00000248668 HOXD10P28358 340 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 SGSHP51688 502 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 ACTR3P61158 418 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 PRKAA1Q13131 559 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 FSCBQ5H9T9 825 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 MFSD4BQ5TF39 518 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 ARHGAP22Q7Z5H3 698 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 NET1Q7Z628 596 aaPredicted RBP15.84■□□□□ 0.13
LRFN1-201ENST00000248668 PTCD2Q8WV60 388 aaKnown RBP15.84■□□□□ 0.13
LRFN1-201ENST00000248668 TTPALQ9BTX7 342 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 STX18Q9P2W9 335 aaKnown RBP15.84■□□□□ 0.13
LRFN1-201ENST00000248668 ZNF212Q9UDV6 495 aa15.84■□□□□ 0.13
LRFN1-201ENST00000248668 IGLV3-10A0A075B6K4 115 aa15.83■□□□□ 0.13
LRFN1-201ENST00000248668 LIN7AO14910 233 aaPredicted RBP15.83■□□□□ 0.13
LRFN1-201ENST00000248668 ATXN1LP0C7T5 689 aaKnown RBP15.83■□□□□ 0.13
LRFN1-201ENST00000248668 PIK3R1P27986 724 aa15.83■□□□□ 0.13
LRFN1-201ENST00000248668 RGRP47804 291 aa15.83■□□□□ 0.13
LRFN1-201ENST00000248668 TSNAXIP1Q2TAA8 658 aa15.83■□□□□ 0.13
LRFN1-201ENST00000248668 TRMT5Q32P41 509 aaKnown RBP15.83■□□□□ 0.13
LRFN1-201ENST00000248668 C1QTNF12Q5T7M4 302 aa15.83■□□□□ 0.13
LRFN1-201ENST00000248668 TMEM207Q6UWW9 146 aa15.83■□□□□ 0.13
LRFN1-201ENST00000248668 KBTBD2Q8IY47 623 aa15.83■□□□□ 0.13
LRFN1-201ENST00000248668 FBXO22Q8NEZ5 403 aa15.83■□□□□ 0.13
LRFN1-201ENST00000248668 PDCD6IPQ8WUM4 868 aaKnown RBP15.83■□□□□ 0.13
LRFN1-201ENST00000248668 POLR1EQ9GZS1 481 aaKnown RBP15.83■□□□□ 0.13
LRFN1-201ENST00000248668 GPBP1L1Q9HC44 474 aaPredicted RBP15.83■□□□□ 0.13
LRFN1-201ENST00000248668 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.83■□□□□ 0.13
LRFN1-201ENST00000248668 CDH22Q9UJ99 828 aa15.83■□□□□ 0.13
LRFN1-201ENST00000248668 CDYLQ9Y232 598 aa15.83■□□□□ 0.13
LRFN1-201ENST00000248668 ANKRD12Q6UB98 2062 aa15.83■□□□□ 0.12
LRFN1-201ENST00000248668 CCNG1P51959 295 aa15.83■□□□□ 0.12
LRFN1-201ENST00000248668 POU4F1Q01851 419 aa15.83■□□□□ 0.12
LRFN1-201ENST00000248668 FAM83EQ2M2I3 478 aa15.83■□□□□ 0.12
LRFN1-201ENST00000248668 SPPL2BQ8TCT7 592 aa15.83■□□□□ 0.12
LRFN1-201ENST00000248668 OCEL1Q9H607 264 aa15.83■□□□□ 0.12
LRFN1-201ENST00000248668 LRRC42Q9Y546 428 aa15.83■□□□□ 0.12
LRFN1-201ENST00000248668 COL4A4P53420 1690 aaPredicted RBP15.83■□□□□ 0.12
LRFN1-201ENST00000248668 LDB2O43679 373 aa15.83■□□□□ 0.12
LRFN1-201ENST00000248668 GOT2P00505 430 aaKnown RBP15.83■□□□□ 0.12
LRFN1-201ENST00000248668 ANPEPP15144 967 aa15.83■□□□□ 0.12
LRFN1-201ENST00000248668 KCNC1P48547 511 aa15.83■□□□□ 0.12
LRFN1-201ENST00000248668 MSLNQ13421 630 aaPredicted RBP15.83■□□□□ 0.12
LRFN1-201ENST00000248668 ACAD11Q709F0 780 aa15.83■□□□□ 0.12
LRFN1-201ENST00000248668 LMNTD2Q8IXW0 634 aa15.83■□□□□ 0.12
LRFN1-201ENST00000248668 RDH11Q8TC12 318 aa15.83■□□□□ 0.12
LRFN1-201ENST00000248668 USP13Q92995 863 aaPredicted RBP15.83■□□□□ 0.12
LRFN1-201ENST00000248668 ZNF333Q96JL9 665 aa15.83■□□□□ 0.12
LRFN1-201ENST00000248668 MRPL57Q9BQC6 102 aaKnown RBP15.83■□□□□ 0.12
LRFN1-201ENST00000248668 MRM3Q9HC36 420 aaKnown RBP15.83■□□□□ 0.12
LRFN1-201ENST00000248668 VPS45Q9NRW7 570 aa15.83■□□□□ 0.12
LRFN1-201ENST00000248668 OLA1Q9NTK5 396 aaKnown RBP15.83■□□□□ 0.12
LRFN1-201ENST00000248668 VWA7Q9Y334 891 aa15.83■□□□□ 0.12
LRFN1-201ENST00000248668 ATP5BP06576 529 aaKnown RBP15.82■□□□□ 0.12
LRFN1-201ENST00000248668 HDCP19113 662 aa15.82■□□□□ 0.12
LRFN1-201ENST00000248668 IL10RBQ08334 325 aa15.82■□□□□ 0.12
LRFN1-201ENST00000248668 RMDN1Q96DB5 314 aa15.82■□□□□ 0.12
LRFN1-201ENST00000248668 NSMCE3Q96MG7 304 aa15.82■□□□□ 0.12
LRFN1-201ENST00000248668 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.82■□□□□ 0.12
LRFN1-201ENST00000248668 ARNT2Q9HBZ2 717 aa15.82■□□□□ 0.12
LRFN1-201ENST00000248668 IL37Q9NZH6 218 aa15.82■□□□□ 0.12
LRFN1-201ENST00000248668 NCKIPSDQ9NZQ3 722 aa15.82■□□□□ 0.12
LRFN1-201ENST00000248668 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.82■□□□□ 0.12
LRFN1-201ENST00000248668 FRMPD3Q5JV73 1810 aa15.82■□□□□ 0.12
LRFN1-201ENST00000248668 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.82■□□□□ 0.12
LRFN1-201ENST00000248668 UBA6A0AVT1 1052 aaPredicted RBP15.82■□□□□ 0.12
LRFN1-201ENST00000248668 FAM92AA1XBS5 289 aa15.82■□□□□ 0.12
LRFN1-201ENST00000248668 A8MT66 165 aa15.82■□□□□ 0.12
LRFN1-201ENST00000248668 CBX4O00257 560 aa15.82■□□□□ 0.12
LRFN1-201ENST00000248668 H2AFYO75367 372 aaKnown RBP15.82■□□□□ 0.12
LRFN1-201ENST00000248668 CDH13P55290 713 aa15.82■□□□□ 0.12
LRFN1-201ENST00000248668 PKNOX1P55347 436 aa15.82■□□□□ 0.12
LRFN1-201ENST00000248668 SEMA3AQ14563 771 aa15.82■□□□□ 0.12
LRFN1-201ENST00000248668 KIAA1841Q6NSI8 718 aa15.82■□□□□ 0.12
LRFN1-201ENST00000248668 LINGO4Q6UY18 593 aa15.82■□□□□ 0.12
LRFN1-201ENST00000248668 WBP2Q969T9 261 aa15.82■□□□□ 0.12
LRFN1-201ENST00000248668 RCN3Q96D15 328 aa15.82■□□□□ 0.12
LRFN1-201ENST00000248668 C1orf21Q9H246 121 aa15.82■□□□□ 0.12
LRFN1-201ENST00000248668 ATP13A1Q9HD20 1204 aa15.82■□□□□ 0.12
LRFN1-201ENST00000248668 ARHGAP26Q9UNA1 814 aa15.82■□□□□ 0.12
LRFN1-201ENST00000248668 GREB1Q4ZG55 1949 aa15.82■□□□□ 0.12
LRFN1-201ENST00000248668 ATP6AP2A0A1C7CYW4 349 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 CCDC162PA2VCL2 907 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 ATP6AP2O75787 350 aa15.81■□□□□ 0.12
LRFN1-201ENST00000248668 CSPG5O95196 566 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms