RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 H7C0S8 307 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 POP4O95707 220 aaKnown RBP14.25□□□□□ -0.13
SDF2-201ENST00000247020 AHSGP02765 367 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 CISD3P0C7P0 127 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 LPOP22079 712 aaPredicted RBP14.25□□□□□ -0.13
SDF2-201ENST00000247020 FCARP24071 287 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 TYK2P29597 1187 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 VIPR2P41587 438 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 EPHB1P54762 984 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 FCHO2Q0JRZ9 810 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 CARD16Q5EG05 197 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 DGKKQ5KSL6 1271 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 ZNF470Q6ECI4 717 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 MRNIPQ6NTE8 343 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 AFTPHQ6ULP2 937 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 CCDC91Q7Z6B0 441 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 TAX1BP1Q86VP1 789 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 CILP2Q8IUL8 1156 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 ETFBKMTQ8IXQ9 262 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 KDM1BQ8NB78 822 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 PIH1D2Q8WWB5 315 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 HDAC10Q969S8 669 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 RIPOR3Q96MK2 946 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 ZNF641Q96N77 438 aaPredicted RBP14.25□□□□□ -0.13
SDF2-201ENST00000247020 CCT8L2Q96SF2 557 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 FAM83CQ9BQN1 747 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 SNX15Q9NRS6 342 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 PCMTD2Q9NV79 361 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.25□□□□□ -0.13
SDF2-201ENST00000247020 EVLQ9UI08 416 aaPredicted RBP14.25□□□□□ -0.13
SDF2-201ENST00000247020 ANKRD6Q9Y2G4 727 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 PCDHB9Q9Y5E1 797 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 ARL5AQ9Y689 179 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 COL4A3Q01955 1670 aa14.25□□□□□ -0.13
SDF2-201ENST00000247020 MUC22E2RYF6 1773 aaPredicted RBP14.24□□□□□ -0.13
SDF2-201ENST00000247020 NDUFAB1O14561 156 aa14.24□□□□□ -0.13
SDF2-201ENST00000247020 LINC01565O15544 149 aa14.24□□□□□ -0.13
SDF2-201ENST00000247020 ATP5BP06576 529 aaKnown RBP14.24□□□□□ -0.13
SDF2-201ENST00000247020 CTSOP43234 321 aaPredicted RBP14.24□□□□□ -0.13
SDF2-201ENST00000247020 STK19P49842 368 aaPredicted RBP14.24□□□□□ -0.13
SDF2-201ENST00000247020 CLCN5P51795 746 aa14.24□□□□□ -0.13
SDF2-201ENST00000247020 SEC24CP53992 1094 aa14.24□□□□□ -0.13
SDF2-201ENST00000247020 PDE1CQ14123 709 aaPredicted RBP14.24□□□□□ -0.13
SDF2-201ENST00000247020 DLG2Q15700 870 aa14.24□□□□□ -0.13
SDF2-201ENST00000247020 MYLK3Q32MK0 819 aa14.24□□□□□ -0.13
SDF2-201ENST00000247020 MFSD6LQ8IWD5 586 aa14.24□□□□□ -0.13
SDF2-201ENST00000247020 TTC30BQ8N4P2 665 aa14.24□□□□□ -0.13
SDF2-201ENST00000247020 MDGA1Q8NFP4 955 aa14.24□□□□□ -0.13
SDF2-201ENST00000247020 GDAP1Q8TB36 358 aa14.24□□□□□ -0.13
SDF2-201ENST00000247020 PDCD6IPQ8WUM4 868 aaKnown RBP14.24□□□□□ -0.13
SDF2-201ENST00000247020 ECHDC3Q96DC8 303 aa14.24□□□□□ -0.13
SDF2-201ENST00000247020 CDKN2AIPNLQ96HQ2 116 aa14.24□□□□□ -0.13
SDF2-201ENST00000247020 DNAJC1Q96KC8 554 aaKnown RBP14.24□□□□□ -0.13
SDF2-201ENST00000247020 RPL10LQ96L21 214 aaKnown RBP14.24□□□□□ -0.13
SDF2-201ENST00000247020 LYSMD1Q96S90 227 aa14.24□□□□□ -0.13
SDF2-201ENST00000247020 PRO3102Q9H379 93 aa14.24□□□□□ -0.13
SDF2-201ENST00000247020 ZNF576Q9H609 170 aa14.24□□□□□ -0.13
SDF2-201ENST00000247020 MTO1Q9Y2Z2 717 aaKnown RBP14.24□□□□□ -0.13
SDF2-201ENST00000247020 PPIL1Q9Y3C6 166 aa14.24□□□□□ -0.13
SDF2-201ENST00000247020 SPO11Q9Y5K1 396 aa14.24□□□□□ -0.13
SDF2-201ENST00000247020 A0A0J9YYE9 177 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 GOLGA8TH3BQL2 631 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 TRBC1P01850 177 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 COL6A2P12110 1019 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 GABRB3P28472 473 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 HMGCLP35914 325 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 MTHFRP42898 656 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 ARSDP51689 593 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 POU4F1Q01851 419 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 CTBP1Q13363 440 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 EIF4HQ15056 248 aaKnown RBP14.23□□□□□ -0.13
SDF2-201ENST00000247020 CTC1Q2NKJ3 1217 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 DENND6AQ8IWF6 608 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 TRIM42Q8IWZ5 723 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 CPA6Q8N4T0 437 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 OR13C4Q8NGS5 318 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 OR6P1Q8NGX9 317 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 OR4L1Q8NH43 312 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 RAB3IL1Q8TBN0 382 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 ZNF473Q8WTR7 871 aaKnown RBP14.23□□□□□ -0.13
SDF2-201ENST00000247020 ELSPBP1Q96BH3 223 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 ASIC4Q96FT7 647 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 TBATAQ96M53 351 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 FAM111AQ96PZ2 611 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 TCF12Q99081 682 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 S1PR5Q9H228 398 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 ECT2Q9H8V3 914 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 MLXIPLQ9NP71 852 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 INTS10Q9NVR2 710 aaKnown RBP14.23□□□□□ -0.13
SDF2-201ENST00000247020 SLC17A7Q9P2U7 560 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 PHTF1Q9UMS5 762 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 VPS9D1Q9Y2B5 631 aa14.23□□□□□ -0.13
SDF2-201ENST00000247020 FAM95CA0A1B0GW59 222 aa14.22□□□□□ -0.13
SDF2-201ENST00000247020 PFDN6O15212 129 aa14.22□□□□□ -0.13
SDF2-201ENST00000247020 BIRC5O15392 142 aa14.22□□□□□ -0.13
SDF2-201ENST00000247020 STX7O15400 261 aaKnown RBP14.22□□□□□ -0.13
SDF2-201ENST00000247020 TULP3O75386 442 aa14.22□□□□□ -0.13
SDF2-201ENST00000247020 PRKCGP05129 697 aa14.22□□□□□ -0.13
SDF2-201ENST00000247020 DLDP09622 509 aaKnown RBP14.22□□□□□ -0.13
SDF2-201ENST00000247020 POU3F3P20264 500 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms