RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 CTXN3Q4LDR2 81 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 IQCF2Q8IXL9 164 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 SUN5Q8TC36 379 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 OR5F1O95221 314 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 ARL4DP49703 201 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 C1DQ13901 141 aaKnown RBP7.55□□□□□ -1.2
RIF1-201ENST00000243326 ACOX1Q15067 660 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 SKIV2LQ15477 1246 aaKnown RBP7.55□□□□□ -1.2
RIF1-201ENST00000243326 EBNA1BP2Q99848 306 aaKnown RBP7.55□□□□□ -1.2
RIF1-201ENST00000243326 AHCTF1Q8WYP5 2266 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 OR51F1A6NGY5 319 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 KDM4BO94953 1096 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 SERPINA6P08185 405 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 HSPA14Q0VDF9 509 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 DNAJB7Q7Z6W7 309 aaPredicted RBP7.55□□□□□ -1.2
RIF1-201ENST00000243326 KIAA0319LQ8IZA0 1049 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 MTMR9Q96QG7 549 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 MYOZ2Q9NPC6 264 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 CHRAC1Q9NRG0 131 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 ERAP1Q9NZ08 941 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 TCHHQ07283 1943 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 YDJCA8MPS7 323 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 MTPNP58546 118 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 TRIM28Q13263 835 aaKnown RBP7.55□□□□□ -1.2
RIF1-201ENST00000243326 PLEKHG6Q3KR16 790 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 PRMT9Q6P2P2 845 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 GLB1LQ6UWU2 654 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 BORCS5Q969J3 196 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 CLN6Q9NWW5 311 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 TESMINQ9Y4I5 508 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 LSM8O95777 96 aaKnown RBP7.55□□□□□ -1.2
RIF1-201ENST00000243326 OR1E1P30953 314 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 SPIRE1Q08AE8 756 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 MZT2BQ6NZ67 158 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 ZFP1Q6P2D0 407 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 OR56A4Q8NGH8 313 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 SLC35C2Q9NQQ7 365 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 ANKDD1BA6NHY2 528 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 TMEM214Q6NUQ4 689 aaKnown RBP7.55□□□□□ -1.2
RIF1-201ENST00000243326 CYP4Z2PQ8N1L4 340 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 LRRC19Q9H756 370 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 CMTM6Q9NX76 183 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 A0A1W2PQ72 361 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 BPGMP07738 259 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 CHRNB2P17787 502 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 IDH3AP50213 366 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 TOR1AIP1Q5JTV8 583 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 TSSK3Q96PN8 268 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 KDM6AO15550 1401 aaPredicted RBP7.55□□□□□ -1.2
RIF1-201ENST00000243326 A0A0J9YYE9 177 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 FANCGO15287 622 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 GABRB2P47870 512 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 IL18Q14116 193 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 FBXL20Q96IG2 436 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 TCF12Q99081 682 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 CENPXA8MT69 81 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 FTH1P02794 183 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 MSH3P20585 1137 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 GRK4P32298 578 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 GBE1Q04446 702 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 TNK2Q07912 1038 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 GRM3Q14832 879 aa7.55□□□□□ -1.2
RIF1-201ENST00000243326 BARX2Q9UMQ3 279 aaPredicted RBP7.55□□□□□ -1.2
RIF1-201ENST00000243326 CPSF4LA6NMK7 179 aaKnown RBP7.54□□□□□ -1.2
RIF1-201ENST00000243326 GNB5O14775 395 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 UMPSP11172 480 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 NMBRP28336 390 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 NADK2Q4G0N4 442 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 ALKBH2Q6NS38 261 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 KRT73Q86Y46 540 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 ALDH1A1P00352 501 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 SPATA31C1P0DKV0 1188 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 CELF3Q5SZQ8 465 aaKnown RBP7.54□□□□□ -1.2
RIF1-201ENST00000243326 ANKS6Q68DC2 871 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 EGFL6Q8IUX8 553 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 FLAD1Q8NFF5 587 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 FCRL4Q96PJ5 515 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 ARL15Q9NXU5 204 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 DKK3Q9UBP4 350 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 BCKDKO14874 412 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 MYL4P12829 197 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 DPEP1P16444 411 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 CPT1BQ92523 772 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 KCND2Q9NZV8 630 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 ADAM30Q9UKF2 790 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 IFRD1O00458 451 aaPredicted RBP7.54□□□□□ -1.2
RIF1-201ENST00000243326 MGRN1O60291 552 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 CPNE3O75131 537 aaKnown RBP7.54□□□□□ -1.2
RIF1-201ENST00000243326 CDC73Q6P1J9 531 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 C4orf22Q6V702 233 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 PACS1Q6VY07 963 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 GALNT15Q8N3T1 639 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 TRNT1Q96Q11 434 aaKnown RBP7.54□□□□□ -1.2
RIF1-201ENST00000243326 KCTD15Q96SI1 283 aaPredicted RBP7.54□□□□□ -1.2
RIF1-201ENST00000243326 SPAG4Q9NPE6 437 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 PDP1Q9P0J1 537 aaPredicted RBP7.54□□□□□ -1.2
RIF1-201ENST00000243326 SETBP1Q9Y6X0 1596 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 SORBS2O94875 1100 aaKnown RBP7.54□□□□□ -1.2
RIF1-201ENST00000243326 SPATA31D3P0C874 917 aa7.54□□□□□ -1.2
RIF1-201ENST00000243326 CASP7P55210 303 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms