RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 SP100P23497 879 aaPredicted RBP16.24■□□□□ 0.19
UBE3D-201ENST00000237186 ETFBP38117 255 aa16.24■□□□□ 0.19
UBE3D-201ENST00000237186 SUOXP51687 545 aa16.24■□□□□ 0.19
UBE3D-201ENST00000237186 KCNQ1P51787 676 aa16.24■□□□□ 0.19
UBE3D-201ENST00000237186 MRPS35P82673 323 aaKnown RBP16.24■□□□□ 0.19
UBE3D-201ENST00000237186 ZNF235Q14590 738 aa16.24■□□□□ 0.19
UBE3D-201ENST00000237186 TRIM68Q6AZZ1 485 aa16.24■□□□□ 0.19
UBE3D-201ENST00000237186 IRGCQ6NXR0 463 aa16.24■□□□□ 0.19
UBE3D-201ENST00000237186 KLHDC10Q6PID8 442 aa16.24■□□□□ 0.19
UBE3D-201ENST00000237186 C16orf89Q6UX73 402 aa16.24■□□□□ 0.19
UBE3D-201ENST00000237186 NPAS4Q8IUM7 802 aa16.24■□□□□ 0.19
UBE3D-201ENST00000237186 KYQ8NBH2 561 aa16.24■□□□□ 0.19
UBE3D-201ENST00000237186 CEP70Q8NHQ1 597 aa16.24■□□□□ 0.19
UBE3D-201ENST00000237186 ANKRD49Q8WVL7 239 aa16.24■□□□□ 0.19
UBE3D-201ENST00000237186 SEPT8Q92599 483 aa16.24■□□□□ 0.19
UBE3D-201ENST00000237186 MIEF2Q96C03 454 aa16.24■□□□□ 0.19
UBE3D-201ENST00000237186 TBATAQ96M53 351 aa16.24■□□□□ 0.19
UBE3D-201ENST00000237186 TRIB3Q96RU7 358 aa16.24■□□□□ 0.19
UBE3D-201ENST00000237186 MGME1Q9BQP7 344 aa16.24■□□□□ 0.19
UBE3D-201ENST00000237186 CYP4F11Q9HBI6 524 aa16.24■□□□□ 0.19
UBE3D-201ENST00000237186 MARCH4Q9P2E8 410 aaPredicted RBP16.24■□□□□ 0.19
UBE3D-201ENST00000237186 PPM1HQ9ULR3 514 aa16.24■□□□□ 0.19
UBE3D-201ENST00000237186 DOCK4Q8N1I0 1966 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 VWA8A3KMH1 1905 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 NEMP2A6NFY4 417 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 A6NHS1 94 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 SDHDO14521 159 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 ZMPSTE24O75844 475 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 SMNDC1O75940 238 aaKnown RBP eCLIP16.23■□□□□ 0.19
UBE3D-201ENST00000237186 EFEMP2O95967 443 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 SERPINF2P08697 491 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 HSPA1AP0DMV8 641 aaKnown RBP16.23■□□□□ 0.19
UBE3D-201ENST00000237186 HSPA1BP0DMV9 641 aaKnown RBP16.23■□□□□ 0.19
UBE3D-201ENST00000237186 KCNA5P22460 613 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 PSMA3P25788 255 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 HOXD9P28356 352 aaPredicted RBP16.23■□□□□ 0.19
UBE3D-201ENST00000237186 ATP5C1P36542 298 aaKnown RBP16.23■□□□□ 0.19
UBE3D-201ENST00000237186 EPHB1P54762 984 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 CDH4P55283 916 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 SULT2A1Q06520 285 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 KLC1Q07866 573 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 SLC8B1Q6J4K2 584 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 TMEM207Q6UWW9 146 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 CHSY3Q70JA7 882 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 ISCA2Q86U28 154 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 SNX32Q86XE0 403 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 HPS6Q86YV9 775 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 SGF29Q96ES7 293 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 PSKH2Q96QS6 385 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 LBHD1Q9BQE6 289 aaPredicted RBP16.23■□□□□ 0.19
UBE3D-201ENST00000237186 UNKQ9C0B0 810 aaKnown RBP16.23■□□□□ 0.19
UBE3D-201ENST00000237186 POPDC3Q9HBV1 291 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 TRPC7Q9HCX4 862 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.23■□□□□ 0.19
UBE3D-201ENST00000237186 STK39Q9UEW8 545 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 LRFN2Q9ULH4 789 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 KCTD3Q9Y597 815 aa16.23■□□□□ 0.19
UBE3D-201ENST00000237186 H3BNC9 293 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 PITPNM1O00562 1244 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 BUD23O43709 281 aaKnown RBP16.22■□□□□ 0.19
UBE3D-201ENST00000237186 RPP40O75818 363 aaKnown RBP16.22■□□□□ 0.19
UBE3D-201ENST00000237186 NDST3O95803 873 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 GLP2RO95838 553 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 OGNP20774 298 aaKnown RBP16.22■□□□□ 0.19
UBE3D-201ENST00000237186 IMPDH1P20839 514 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 FDXRP22570 491 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 CDKN2DP55273 166 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 NFKB2Q00653 900 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 GNA12Q03113 381 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 PEX6Q13608 980 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 RFTN1Q14699 578 aaPredicted RBP16.22■□□□□ 0.19
UBE3D-201ENST00000237186 MRNIPQ6NTE8 343 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 TAS1R1Q7RTX1 841 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 KBTBD6Q86V97 674 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 FAM126BQ8IXS8 530 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 DSELQ8IZU8 1212 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 LGI2Q8N0V4 545 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 PELI3Q8N2H9 469 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 BBS5Q8N3I7 341 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 ZNF784Q8NCA9 323 aaPredicted RBP16.22■□□□□ 0.19
UBE3D-201ENST00000237186 PDZD8Q8NEN9 1154 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 GIPC2Q8TF65 315 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 L3HYPDHQ96EM0 354 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 SERPINI1Q99574 410 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 TTC1Q99614 292 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 MEAF6Q9HAF1 191 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 COPG1Q9Y678 874 aaKnown RBP16.22■□□□□ 0.19
UBE3D-201ENST00000237186 A0A0D9SEW6 157 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 CD3EAPO15446 510 aaKnown RBP16.22■□□□□ 0.19
UBE3D-201ENST00000237186 PDE5AO76074 875 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 CD1EP15812 388 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 SLC6A4P31645 630 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 SLC11A2P49281 568 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 TUFMP49411 452 aaKnown RBP16.22■□□□□ 0.19
UBE3D-201ENST00000237186 INHBCP55103 352 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 PDCD2Q16342 344 aaPredicted RBP16.22■□□□□ 0.19
UBE3D-201ENST00000237186 TMEM173Q86WV6 379 aaPredicted RBP16.22■□□□□ 0.19
UBE3D-201ENST00000237186 KBTBD2Q8IY47 623 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 AFAP1L2Q8N4X5 818 aa16.22■□□□□ 0.19
UBE3D-201ENST00000237186 FBXO22Q8NEZ5 403 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms