RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 LRTOMTQ8WZ04 291 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 BHMTQ93088 406 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 NR1H4Q96RI1 486 aaPredicted RBP9.18□□□□□ -0.94
SYDE2-201ENST00000234668 PIF1Q9H611 641 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 CCSER2Q9H7U1 834 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 SPATS2LQ9NUQ6 558 aaKnown RBP9.18□□□□□ -0.94
SYDE2-201ENST00000234668 MID2Q9UJV3 735 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 TRAF6Q9Y4K3 522 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 PRORSD1PA6NEY8 169 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 M0QZQ0 153 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 PSMD3O43242 534 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 TADA2AO75478 443 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 LTA4HP09960 611 aaKnown RBP9.18□□□□□ -0.94
SYDE2-201ENST00000234668 UGT1A6P19224 532 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 HABP4Q5JVS0 413 aaKnown RBP9.18□□□□□ -0.94
SYDE2-201ENST00000234668 BRMS1LQ5PSV4 323 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 FAM171A1Q5VUB5 890 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 CILP2Q8IUL8 1156 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 CNTN4Q8IWV2 1026 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 OR7D4Q8NG98 312 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 DIS3LQ8TF46 1054 aaKnown RBP9.18□□□□□ -0.94
SYDE2-201ENST00000234668 JADE3Q92613 823 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 SERPINI1Q99574 410 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 MRPL1Q9BYD6 325 aaKnown RBP9.18□□□□□ -0.94
SYDE2-201ENST00000234668 SLC25A51Q9H1U9 297 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 NMRK2Q9NPI5 230 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 RGS18Q9NS28 235 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 TIMM22Q9Y584 194 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 C15orf38-AP3S2A0A0A6YYH1 394 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 PSMD12O00232 456 aaPredicted RBP9.18□□□□□ -0.94
SYDE2-201ENST00000234668 CRTAMO95727 393 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 S1PR4O95977 384 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 GOT2P00505 430 aaKnown RBP9.18□□□□□ -0.94
SYDE2-201ENST00000234668 SPATA31D3P0C874 917 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 BMP1P13497 986 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 RENBPP51606 427 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 SH3BP2P78314 561 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 POU4F1Q01851 419 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 CAPRIN1Q14444 709 aaKnown RBP9.18□□□□□ -0.94
SYDE2-201ENST00000234668 POLD3Q15054 466 aaPredicted RBP9.18□□□□□ -0.94
SYDE2-201ENST00000234668 CYTH1Q15438 398 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 KIF19Q2TAC6 998 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 LIN52Q52LA3 116 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 CLLU1OSQ5K130 101 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 AGAP9Q5VTM2 703 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 KIAA0930Q6ICG6 404 aaPredicted RBP9.18□□□□□ -0.94
SYDE2-201ENST00000234668 ZNF549Q6P9A3 640 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 RSPO2Q6UXX9 243 aaPredicted RBP9.18□□□□□ -0.94
SYDE2-201ENST00000234668 CYHR1Q6ZMK1 362 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 SPATA31D4Q6ZUB0 917 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 ARPINQ7Z6K5 226 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 ISCA2Q86U28 154 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 DDIASQ8IXT1 998 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 NUP93Q8N1F7 819 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 TRPC4APQ8TEL6 797 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 PDCD6IPQ8WUM4 868 aaKnown RBP9.18□□□□□ -0.94
SYDE2-201ENST00000234668 LPGAT1Q92604 370 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 FBXO32Q969P5 355 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 IMP4Q96G21 291 aaKnown RBP9.18□□□□□ -0.94
SYDE2-201ENST00000234668 SUSD3Q96L08 255 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 NSMCE3Q96MG7 304 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 TSPAN18Q96SJ8 248 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 TRIM4Q9C037 500 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 ZNF385DQ9H6B1 395 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 SPC25Q9HBM1 224 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 BPIFA1Q9NP55 256 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 NSMCE4AQ9NXX6 385 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 GALPQ9UBC7 116 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 EGFL7Q9UHF1 273 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 PCDHGA7Q9Y5G6 932 aa9.18□□□□□ -0.94
SYDE2-201ENST00000234668 CDH23Q9H251 3354 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 HEATR9A2RTY3 570 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 CCDC162PA2VCL2 907 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 H3BMM5 538 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 FGF10O15520 208 aaPredicted RBP9.17□□□□□ -0.94
SYDE2-201ENST00000234668 H2AFYO75367 372 aaKnown RBP9.17□□□□□ -0.94
SYDE2-201ENST00000234668 CYP11A1P05108 521 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 LINC00032P0C843 101 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 CKMT2P17540 419 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 PRDX6P30041 224 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 FMO4P31512 558 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 HADHAP40939 763 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 APLP1P51693 650 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 PRKAA2P54646 552 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 PLIN5Q00G26 463 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 GRB7Q14451 532 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 GSTA3Q16772 222 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 VPS26BQ4G0F5 336 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 PIWIL4Q7Z3Z4 852 aaKnown RBP9.17□□□□□ -0.94
SYDE2-201ENST00000234668 IFNEQ86WN2 208 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 PGAM4Q8N0Y7 254 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 PTGR2Q8N8N7 351 aaPredicted RBP9.17□□□□□ -0.94
SYDE2-201ENST00000234668 RDH11Q8TC12 318 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 CNDP1Q96KN2 507 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 HBEGFQ99075 208 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 PRPF18Q99633 342 aaKnown RBP9.17□□□□□ -0.94
SYDE2-201ENST00000234668 GPR62Q9BZJ7 368 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 ZYG11BQ9C0D3 744 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 PDP2Q9P2J9 529 aa9.17□□□□□ -0.94
SYDE2-201ENST00000234668 VTI1BQ9UEU0 232 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms