RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 BRD9Q9H8M2 597 aa18.67■□□□□ 0.58
SNX17-201ENST00000233575 ZNF180Q9UJW8 692 aa18.67■□□□□ 0.58
SNX17-201ENST00000233575 OR51F1A6NGY5 319 aa18.67■□□□□ 0.58
SNX17-201ENST00000233575 SOCS5O75159 536 aa18.67■□□□□ 0.58
SNX17-201ENST00000233575 ASLP04424 464 aa18.67■□□□□ 0.58
SNX17-201ENST00000233575 UGT2B4P06133 528 aa18.67■□□□□ 0.58
SNX17-201ENST00000233575 SRPRAP08240 638 aaKnown RBP18.67■□□□□ 0.58
SNX17-201ENST00000233575 CA4P22748 312 aa18.67■□□□□ 0.58
SNX17-201ENST00000233575 SERPINA4P29622 427 aa18.67■□□□□ 0.58
SNX17-201ENST00000233575 ATP5DP30049 168 aa18.67■□□□□ 0.58
SNX17-201ENST00000233575 NNMTP40261 264 aa18.67■□□□□ 0.58
SNX17-201ENST00000233575 EPHB1P54762 984 aa18.67■□□□□ 0.58
SNX17-201ENST00000233575 PDPK2PQ6A1A2 396 aa18.67■□□□□ 0.58
SNX17-201ENST00000233575 DENND6AQ8IWF6 608 aa18.67■□□□□ 0.58
SNX17-201ENST00000233575 MDM1Q8TC05 714 aa18.67■□□□□ 0.58
SNX17-201ENST00000233575 PTPRN2Q92932 1015 aa18.67■□□□□ 0.58
SNX17-201ENST00000233575 CDX2Q99626 313 aaPredicted RBP18.67■□□□□ 0.58
SNX17-201ENST00000233575 ADAM21Q9UKJ8 722 aa18.67■□□□□ 0.58
SNX17-201ENST00000233575 HCN2Q9UL51 889 aa18.67■□□□□ 0.58
SNX17-201ENST00000233575 TBC1D3BA6NDS4 549 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 TRIM49D1C9J1S8 452 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 GOLGA8RI6L899 631 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 MBTPS2O43462 519 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 PAPSS2O95340 614 aaPredicted RBP18.66■□□□□ 0.58
SNX17-201ENST00000233575 HLA-EP13747 358 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 SEMG2Q02383 582 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 MROH9Q5TGP6 573 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 ZNF449Q6P9G9 518 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 KDM7AQ6ZMT4 941 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 HDAC10Q969S8 669 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 ATXN7L3BQ96GX2 97 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 SERAC1Q96JX3 654 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 TBATAQ96M53 351 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 SELENOSQ9BQE4 189 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 TRABDQ9H4I3 376 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 SUV39H2Q9H5I1 410 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 PLA2G4CQ9UP65 541 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 TCF20Q9UGU0 1960 aaKnown RBP18.66■□□□□ 0.58
SNX17-201ENST00000233575 IQANK1A0A1B0GTG1 560 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 POP4O95707 220 aaKnown RBP18.66■□□□□ 0.58
SNX17-201ENST00000233575 GRIA4P48058 902 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 ZNF140P52738 457 aaPredicted RBP18.66■□□□□ 0.58
SNX17-201ENST00000233575 CTBP1Q13363 440 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 TTC19Q6DKK2 380 aaPredicted RBP18.66■□□□□ 0.58
SNX17-201ENST00000233575 STRA8Q7Z7C7 330 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 PAF1Q8N7H5 531 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 EID2BQ96D98 161 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 ECHDC3Q96DC8 303 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 CPEB1Q9BZB8 566 aaKnown RBP18.66■□□□□ 0.58
SNX17-201ENST00000233575 WASF2Q9Y6W5 498 aa18.66■□□□□ 0.58
SNX17-201ENST00000233575 WASH3PC4AMC7 463 aa18.65■□□□□ 0.58
SNX17-201ENST00000233575 SPAG7O75391 227 aa18.65■□□□□ 0.58
SNX17-201ENST00000233575 KAT7O95251 611 aa18.65■□□□□ 0.58
SNX17-201ENST00000233575 CTSLP07711 333 aa18.65■□□□□ 0.58
SNX17-201ENST00000233575 BRAFP15056 766 aa18.65■□□□□ 0.58
SNX17-201ENST00000233575 PAMP19021 973 aa18.65■□□□□ 0.58
SNX17-201ENST00000233575 RECQLP46063 649 aaPredicted RBP18.65■□□□□ 0.58
SNX17-201ENST00000233575 MPP1Q00013 466 aa18.65■□□□□ 0.58
SNX17-201ENST00000233575 ACVR1Q04771 509 aa18.65■□□□□ 0.58
SNX17-201ENST00000233575 MPP2Q14168 576 aa18.65■□□□□ 0.58
SNX17-201ENST00000233575 TAF1AQ15573 450 aaPredicted RBP18.65■□□□□ 0.58
SNX17-201ENST00000233575 TAOK1Q7L7X3 1001 aa18.65■□□□□ 0.58
SNX17-201ENST00000233575 OR4K2Q8NGD2 314 aa18.65■□□□□ 0.58
SNX17-201ENST00000233575 TUBGCP5Q96RT8 1024 aa18.65■□□□□ 0.58
SNX17-201ENST00000233575 CPNE1Q99829 537 aa18.65■□□□□ 0.58
SNX17-201ENST00000233575 A0A0J9YYE9 177 aa18.64■□□□□ 0.58
SNX17-201ENST00000233575 A8MX80 341 aa18.64■□□□□ 0.58
SNX17-201ENST00000233575 LEFTY1O75610 366 aa18.64■□□□□ 0.58
SNX17-201ENST00000233575 CRTAMO95727 393 aa18.64■□□□□ 0.58
SNX17-201ENST00000233575 TRBC1P01850 177 aa18.64■□□□□ 0.58
SNX17-201ENST00000233575 SNRPAP09012 282 aaKnown RBP18.64■□□□□ 0.58
SNX17-201ENST00000233575 KRT4P19013 534 aa18.64■□□□□ 0.58
SNX17-201ENST00000233575 GABRB3P28472 473 aa18.64■□□□□ 0.58
SNX17-201ENST00000233575 GP5P40197 560 aa18.64■□□□□ 0.58
SNX17-201ENST00000233575 VASPP50552 380 aaPredicted RBP18.64■□□□□ 0.58
SNX17-201ENST00000233575 ST8SIA6P61647 398 aa18.64■□□□□ 0.58
SNX17-201ENST00000233575 NAB1Q13506 487 aa18.64■□□□□ 0.58
SNX17-201ENST00000233575 ZNF234Q14588 700 aa18.64■□□□□ 0.58
SNX17-201ENST00000233575 EIF4HQ15056 248 aaKnown RBP18.64■□□□□ 0.58
SNX17-201ENST00000233575 FNDC3BQ53EP0 1204 aaKnown RBP18.64■□□□□ 0.58
SNX17-201ENST00000233575 LRRC73Q5JTD7 316 aa18.64■□□□□ 0.58
SNX17-201ENST00000233575 ZNF470Q6ECI4 717 aa18.64■□□□□ 0.58
SNX17-201ENST00000233575 NLRP9Q7RTR0 991 aa18.64■□□□□ 0.58
SNX17-201ENST00000233575 LYSMD3Q7Z3D4 306 aa18.64■□□□□ 0.58
SNX17-201ENST00000233575 PTAR1Q7Z6K3 402 aaPredicted RBP18.64■□□□□ 0.58
SNX17-201ENST00000233575 TTC30BQ8N4P2 665 aa18.64■□□□□ 0.58
SNX17-201ENST00000233575 OR6P1Q8NGX9 317 aa18.64■□□□□ 0.58
SNX17-201ENST00000233575 ERLEC1Q96DZ1 483 aa18.64■□□□□ 0.58
SNX17-201ENST00000233575 ACOX2Q99424 681 aa18.64■□□□□ 0.58
SNX17-201ENST00000233575 BPIFA1Q9NP55 256 aa18.64■□□□□ 0.58
SNX17-201ENST00000233575 POLR3BQ9NW08 1133 aaPredicted RBP18.64■□□□□ 0.58
SNX17-201ENST00000233575 ZNF711Q9Y462 761 aa18.64■□□□□ 0.58
SNX17-201ENST00000233575 KRT37O76014 449 aa18.64■□□□□ 0.57
SNX17-201ENST00000233575 HNF1BP35680 557 aa18.64■□□□□ 0.57
SNX17-201ENST00000233575 SLC1A2P43004 574 aa18.64■□□□□ 0.57
SNX17-201ENST00000233575 SMAD4Q13485 552 aaKnown RBP18.64■□□□□ 0.57
SNX17-201ENST00000233575 ARSIQ5FYB1 569 aa18.64■□□□□ 0.57
SNX17-201ENST00000233575 EMC10Q5UCC4 262 aa18.64■□□□□ 0.57
SNX17-201ENST00000233575 ARMC3Q5W041 872 aa18.64■□□□□ 0.57
SNX17-201ENST00000233575 NEPROQ6NW34 567 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms