RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 PCDH15Q96QU1 1955 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 A0A1W2PQU0 124 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 CFAP69A5D8W1 941 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 PRAMEF26H0Y7S4 382 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 KCNK1O00180 336 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 KCNK3O14649 394 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 MUSKO15146 869 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 HTRA2O43464 458 aaPredicted RBP11.36□□□□□ -0.59
SF3B6-201ENST00000233468 LATO43561 262 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 IGHV4-34P06331 123 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 CYP2A6P11509 494 aaPredicted RBP11.36□□□□□ -0.59
SF3B6-201ENST00000233468 TIMP2P16035 220 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 AKT2P31751 481 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 RGRP47804 291 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 C21orf59P57076 290 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 MAXP61244 160 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 RPL26P61254 145 aaKnown RBP11.36□□□□□ -0.59
SF3B6-201ENST00000233468 OVGP1Q12889 678 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 STAT4Q14765 748 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 NOMO1Q15155 1222 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 LLGL1Q15334 1064 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 NAPEPLDQ6IQ20 393 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 CCDC70Q6NSX1 233 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 ZC3H18Q86VM9 953 aaKnown RBP11.36□□□□□ -0.59
SF3B6-201ENST00000233468 PGBD5Q8N414 524 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 PDCD6IPQ8WUM4 868 aaKnown RBP11.36□□□□□ -0.59
SF3B6-201ENST00000233468 HTR3CQ8WXA8 447 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 ASB12Q8WXK4 309 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 LRRC45Q96CN5 670 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 ECHDC3Q96DC8 303 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 SERAC1Q96JX3 654 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 QKIQ96PU8 341 aaKnown RBP eCLIP11.36□□□□□ -0.59
SF3B6-201ENST00000233468 SCNM1Q9BWG6 230 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 AASDHPPTQ9NRN7 309 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 KCTD5Q9NXV2 234 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 SAE1Q9UBE0 346 aaPredicted RBP11.36□□□□□ -0.59
SF3B6-201ENST00000233468 RPL26L1Q9UNX3 145 aaKnown RBP11.36□□□□□ -0.59
SF3B6-201ENST00000233468 ATP8A1Q9Y2Q0 1164 aa11.36□□□□□ -0.59
SF3B6-201ENST00000233468 TRAFD1O14545 582 aaPredicted RBP11.35□□□□□ -0.59
SF3B6-201ENST00000233468 AREL1O15033 823 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 CPP00450 1065 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 HLA-DQB2P05538 268 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 RBP3P10745 1247 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 CEACAM1P13688 526 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 PECAM1P16284 738 aaPredicted RBP11.35□□□□□ -0.59
SF3B6-201ENST00000233468 ENGP17813 658 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 HNRNPA2B1P22626 353 aaKnown RBP11.35□□□□□ -0.59
SF3B6-201ENST00000233468 MAOBP27338 520 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 GRIA4P48058 902 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 EPHB1P54762 984 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 TAS2R38P59533 333 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 EIF3EP60228 445 aaKnown RBP11.35□□□□□ -0.59
SF3B6-201ENST00000233468 FAM193AP78312 1265 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 OTUD4Q01804 1114 aaKnown RBP11.35□□□□□ -0.59
SF3B6-201ENST00000233468 ZNF211Q13398 564 aaPredicted RBP11.35□□□□□ -0.59
SF3B6-201ENST00000233468 SLC14A2Q15849 920 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 TMEM52BQ4KMG9 183 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 ITPRIPL1Q6GPH6 555 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 DARS2Q6PI48 645 aaKnown RBP11.35□□□□□ -0.59
SF3B6-201ENST00000233468 USP45Q70EL2 814 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 IQCHQ86VS3 1027 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 ZCCHC9Q8N567 271 aaKnown RBP11.35□□□□□ -0.59
SF3B6-201ENST00000233468 OR2I1PQ8NGU4 316 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 ACTL9Q8TC94 416 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 TEKT5Q96M29 485 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 AGAP3Q96P47 875 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 SRPK1Q96SB4 655 aaKnown RBP11.35□□□□□ -0.59
SF3B6-201ENST00000233468 ADGRE3Q9BY15 652 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 SLC17A9Q9BYT1 436 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 SLC25A51Q9H1U9 297 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 KCNF1Q9H3M0 494 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 KLHL8Q9P2G9 620 aaPredicted RBP11.35□□□□□ -0.59
SF3B6-201ENST00000233468 PCDHB9Q9Y5E1 797 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 PCDHGC4Q9Y5F7 938 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 RAI2Q9Y5P3 530 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 BAHCC1Q9P281 2608 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 CKAP5Q14008 2032 aa11.35□□□□□ -0.59
SF3B6-201ENST00000233468 ITPR1Q14643 2758 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 PKD1L2Q7Z442 2459 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 DOCK4Q8N1I0 1966 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 SPAARA0A1B0GVQ0 90 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 GOLGA6CA6NDK9 693 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 GOLGA6BA6NDN3 693 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 DFNA5O60443 496 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 TM7SF2O76062 418 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 PGLSO95336 258 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 GOLGA6DP0CG33 693 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 CSRP1P21291 193 aaKnown RBP11.34□□□□□ -0.59
SF3B6-201ENST00000233468 PTPN3P26045 913 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 CD38P28907 300 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 MAT2AP31153 395 aaKnown RBP11.34□□□□□ -0.59
SF3B6-201ENST00000233468 ABL2P42684 1182 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 PPP2CBP62714 309 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 PPP2CAP67775 309 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 ADCY2Q08462 1091 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 ZBTB17Q13105 803 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 PRPSAP1Q14558 356 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 ZNF284Q2VY69 593 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 TMEM259Q4ZIN3 620 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 ZNF569Q5MCW4 686 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms