RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 NPIPB15A6NHN6 443 aaPredicted RBP13.8□□□□□ -0.2
VEGFA-201ENST00000230480 A8MX80 341 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 SH3BP5O60239 455 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 SOCS5O75159 536 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 SYPP08247 313 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 ALPIP09923 528 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 C6P13671 934 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 MX2P20592 715 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 CSRP1P21291 193 aaKnown RBP13.8□□□□□ -0.2
VEGFA-201ENST00000230480 TGM2P21980 687 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 SERPINA4P29622 427 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 NUDT1P36639 197 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 RXRGP48443 463 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 SUOXP51687 545 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 FZD2Q14332 565 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 PDK1Q15118 436 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 NOMO1Q15155 1222 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 RALGPS1Q5JS13 557 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 ZFYVE27Q5T4F4 411 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.8□□□□□ -0.2
VEGFA-201ENST00000230480 RNF10Q8N5U6 811 aaKnown RBP13.8□□□□□ -0.2
VEGFA-201ENST00000230480 PLA2G15Q8NCC3 412 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 CCNYQ8ND76 341 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 DEFB124Q8NES8 71 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 SAP25Q8TEE9 199 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 IMP4Q96G21 291 aaKnown RBP13.8□□□□□ -0.2
VEGFA-201ENST00000230480 CALR3Q96L12 384 aaKnown RBP13.8□□□□□ -0.2
VEGFA-201ENST00000230480 TEKT5Q96M29 485 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 COQ10AQ96MF6 247 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 ZNF830Q96NB3 372 aaPredicted RBP13.8□□□□□ -0.2
VEGFA-201ENST00000230480 FAM118BQ9BPY3 351 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 TDRD1Q9BXT4 1180 aaKnown RBP13.8□□□□□ -0.2
VEGFA-201ENST00000230480 OSBPL8Q9BZF1 889 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 USP29Q9HBJ7 922 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 LUC7LQ9NQ29 371 aaKnown RBP13.8□□□□□ -0.2
VEGFA-201ENST00000230480 TM7SF3Q9NS93 570 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 AMACRQ9UHK6 382 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 EFR3BQ9Y2G0 817 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 R3HDM2Q9Y2K5 976 aaKnown RBP13.8□□□□□ -0.2
VEGFA-201ENST00000230480 PLXNB3Q9ULL4 1909 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 SCN8AQ9UQD0 1980 aa13.8□□□□□ -0.2
VEGFA-201ENST00000230480 CCDC66A2RUB6 948 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 ZFXP17010 805 aaPredicted RBP13.79□□□□□ -0.2
VEGFA-201ENST00000230480 NR2C2P49116 596 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 RWDD2BP57060 319 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 COPS2P61201 443 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 IL9RQ01113 521 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 CCDC15Q0P6D6 951 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 EIF2B5Q13144 721 aaKnown RBP13.79□□□□□ -0.2
VEGFA-201ENST00000230480 TFDP2Q14188 446 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 CNGA3Q16281 694 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 TEX44Q53QW1 395 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 N4BP2L1Q5TBK1 243 aaPredicted RBP13.79□□□□□ -0.2
VEGFA-201ENST00000230480 TIGD7Q6NT04 549 aaPredicted RBP13.79□□□□□ -0.2
VEGFA-201ENST00000230480 CRTC1Q6UUV9 634 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 Q6ZSR6 202 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 HSD11B1LQ7Z5J1 315 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 TECPR1Q7Z6L1 1165 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 GATAD2AQ86YP4 633 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 REXO1L1PQ8IX06 675 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 SLC25A45Q8N413 288 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 SPATA22Q8NHS9 363 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 ACTL9Q8TC94 416 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 SCRN2Q96FV2 425 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 RBM41Q96IZ5 413 aaKnown RBP13.79□□□□□ -0.2
VEGFA-201ENST00000230480 WDR24Q96S15 920 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 ELF4Q99607 663 aaPredicted RBP13.79□□□□□ -0.2
VEGFA-201ENST00000230480 MAK16Q9BXY0 300 aaKnown RBP13.79□□□□□ -0.2
VEGFA-201ENST00000230480 POLR1EQ9GZS1 481 aaKnown RBP13.79□□□□□ -0.2
VEGFA-201ENST00000230480 ERVMER34-1Q9H9K5 563 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 TOR4AQ9NXH8 423 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 GUCA1BQ9UMX6 200 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 CHKBQ9Y259 395 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 RP1P56715 2156 aa13.79□□□□□ -0.2
VEGFA-201ENST00000230480 PTPRBP23467 1997 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 CFAP69A5D8W1 941 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 APOC4-APOC2K7ER74 178 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 K7ESM1 405 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 PCDHGA12O60330 932 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 OPHN1O60890 802 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 TM7SF2O76062 418 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 HEXIM1O94992 359 aaKnown RBP13.78□□□□□ -0.2
VEGFA-201ENST00000230480 IPO7O95373 1038 aaKnown RBP13.78□□□□□ -0.2
VEGFA-201ENST00000230480 APOC2P02655 101 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 THEGLP0DJG4 465 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 CTPS1P17812 591 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 HNF1BP35680 557 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 CD86P42081 329 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 OTUD4Q01804 1114 aaKnown RBP13.78□□□□□ -0.2
VEGFA-201ENST00000230480 PTSQ03393 145 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 AP1B1Q10567 949 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 SLC14A1Q13336 389 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 STAT4Q14765 748 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 IRF4Q15306 451 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 TEAD4Q15561 434 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 QPCTQ16769 361 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 MEI1Q5TIA1 1274 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 KDELC1Q6UW63 502 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 KYAT3Q6YP21 454 aaKnown RBP13.78□□□□□ -0.2
VEGFA-201ENST00000230480 PEX26Q7Z412 305 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms