RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 FAM153CQ494X1 144 aa19.02■□□□□ 0.63
SMPD3-201ENST00000219334 NEK5Q6P3R8 708 aa19.02■□□□□ 0.63
SMPD3-201ENST00000219334 EIF3MQ7L2H7 374 aaKnown RBP19.02■□□□□ 0.63
SMPD3-201ENST00000219334 ARMC8Q8IUR7 673 aa19.02■□□□□ 0.63
SMPD3-201ENST00000219334 ACMSDQ8TDX5 336 aa19.02■□□□□ 0.63
SMPD3-201ENST00000219334 RORBQ92753 470 aa19.02■□□□□ 0.63
SMPD3-201ENST00000219334 TCF25Q9BQ70 676 aa19.02■□□□□ 0.63
SMPD3-201ENST00000219334 LRRC72A6NJI9 287 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 CA12O43570 354 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 CDK14O94921 469 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 CAPN1P07384 714 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 CYP3A5P20815 502 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 LCLAT1Q6UWP7 414 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 PHC3Q8NDX5 983 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 SPRTNQ9H040 489 aaPredicted RBP19.01■□□□□ 0.63
SMPD3-201ENST00000219334 GLOD4Q9HC38 313 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 CCNE2O96020 404 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 SLC5A3P53794 718 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 CTBP1Q13363 440 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 CAPN13Q6MZZ7 669 aaPredicted RBP19.01■□□□□ 0.63
SMPD3-201ENST00000219334 GPR180Q86V85 440 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 DHRSXQ8N5I4 330 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 SMYD1Q8NB12 490 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 OR52K2Q8NGK3 314 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 HDAC7Q8WUI4 952 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 CYLDQ9NQC7 956 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 COPG2Q9UBF2 871 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 MRTO4Q9UKD2 239 aaKnown RBP19.01■□□□□ 0.63
SMPD3-201ENST00000219334 ITGAXP20702 1163 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 GRIA4P48058 902 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 ZNF549Q6P9A3 640 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 CACTIN-AS1Q8N1I8 211 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 C11orf84Q9BUA3 381 aaPredicted RBP19.01■□□□□ 0.63
SMPD3-201ENST00000219334 VAV3Q9UKW4 847 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 SCN2BO60939 215 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 SQLEQ14534 574 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 UBE2R2Q712K3 238 aaPredicted RBP19.01■□□□□ 0.63
SMPD3-201ENST00000219334 FAM220AQ7Z4H9 259 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 DENND6AQ8IWF6 608 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 MMADHCQ9H3L0 296 aaPredicted RBP19.01■□□□□ 0.63
SMPD3-201ENST00000219334 PCYOX1Q9UHG3 505 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 ZMYND8Q9ULU4 1186 aaPredicted RBP19.01■□□□□ 0.63
SMPD3-201ENST00000219334 SNUPNO95149 360 aaKnown RBP19.01■□□□□ 0.63
SMPD3-201ENST00000219334 H2AFXP16104 143 aaPredicted RBP19.01■□□□□ 0.63
SMPD3-201ENST00000219334 SF1Q15637 639 aaKnown RBP19.01■□□□□ 0.63
SMPD3-201ENST00000219334 CREG2Q8IUH2 290 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 PRRG4Q9BZD6 226 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 RACGAP1Q9H0H5 632 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 AGO3Q9H9G7 860 aaKnown RBP19.01■□□□□ 0.63
SMPD3-201ENST00000219334 ARHGEF3Q9NR81 526 aa19.01■□□□□ 0.63
SMPD3-201ENST00000219334 AP3D1O14617 1153 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 ITGA2P17301 1181 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 PCDH20Q8N6Y1 951 aaKnown RBP19■□□□□ 0.63
SMPD3-201ENST00000219334 P2RY11Q96G91 374 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 GLYATL1P3A0A0U1RQE8 302 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 ATG13O75143 517 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 TACR2P21452 398 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 SSR2P43308 183 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 WASHC2DQ5SRD0 308 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 TRIQKQ629K1 86 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 AADATQ8N5Z0 425 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 IRGQQ8WZA9 623 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 HIC2Q96JB3 615 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 NIFKQ9BYG3 293 aaKnown RBP19■□□□□ 0.63
SMPD3-201ENST00000219334 PCDH18Q9HCL0 1135 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 VWA7Q9Y334 891 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 MDM4O15151 490 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 CDC42P60953 191 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 TEAD4Q15561 434 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 MIIPQ5JXC2 388 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 OLFM1Q99784 485 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 LRRC19Q9H756 370 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 EVLQ9UI08 416 aaPredicted RBP19■□□□□ 0.63
SMPD3-201ENST00000219334 TGFB1I1O43294 461 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 PDE5AO76074 875 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 SMPD1P17405 629 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 YBEYP58557 167 aaPredicted RBP19■□□□□ 0.63
SMPD3-201ENST00000219334 BNC1Q01954 994 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 HERVK_113Q902F9 699 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 CNPPD1Q9BV87 410 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 ACE2Q9BYF1 805 aaPredicted RBP19■□□□□ 0.63
SMPD3-201ENST00000219334 B3GNT5Q9BYG0 378 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 REXO4Q9GZR2 422 aaKnown RBP19■□□□□ 0.63
SMPD3-201ENST00000219334 C3orf14Q9HBI5 128 aa19■□□□□ 0.63
SMPD3-201ENST00000219334 TSPAN1O60635 241 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 SERPINB7O75635 380 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 STBD1O95210 358 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 PROCP04070 461 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 BMP7P18075 431 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 PRKCZQ05513 592 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 NDUFA9Q16795 377 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 GCNT7Q6ZNI0 430 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 GDPD5Q8WTR4 605 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 AIF1LQ9BQI0 150 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 H3BM21 787 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 ITGA2BP08514 1039 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 RHOQP17081 205 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 GSTM5P46439 218 aa18.99■□□□□ 0.63
SMPD3-201ENST00000219334 ILF3Q12906 894 aaKnown RBP eCLIP18.99■□□□□ 0.63
SMPD3-201ENST00000219334 PPP2R2DQ66LE6 453 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms