RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 OR51F1A6NGY5 319 aa29.8■■■□□ 2.36
PABPN1-201ENST00000216727 CD3EAPO15446 510 aaKnown RBP29.8■■■□□ 2.36
PABPN1-201ENST00000216727 HOXB8P17481 243 aaPredicted RBP29.8■■■□□ 2.36
PABPN1-201ENST00000216727 PSMA3P25788 255 aa29.8■■■□□ 2.36
PABPN1-201ENST00000216727 GABRR2P28476 465 aa29.8■■■□□ 2.36
PABPN1-201ENST00000216727 SLC26A3P40879 764 aa29.8■■■□□ 2.36
PABPN1-201ENST00000216727 GRIA4P48058 902 aa29.8■■■□□ 2.36
PABPN1-201ENST00000216727 IDH3AP50213 366 aa29.8■■■□□ 2.36
PABPN1-201ENST00000216727 HTRA4P83105 476 aaPredicted RBP29.8■■■□□ 2.36
PABPN1-201ENST00000216727 LILRA6Q6PI73 481 aa29.8■■■□□ 2.36
PABPN1-201ENST00000216727 GAREM2Q75VX8 874 aa29.8■■■□□ 2.36
PABPN1-201ENST00000216727 ZNF781Q8N8C0 355 aa29.8■■■□□ 2.36
PABPN1-201ENST00000216727 OR13C4Q8NGS5 318 aa29.8■■■□□ 2.36
PABPN1-201ENST00000216727 MRPS31Q92665 395 aaKnown RBP29.8■■■□□ 2.36
PABPN1-201ENST00000216727 UBXN10Q96LJ8 280 aa29.8■■■□□ 2.36
PABPN1-201ENST00000216727 SUDS3Q9H7L9 328 aaPredicted RBP29.8■■■□□ 2.36
PABPN1-201ENST00000216727 NLE1Q9NVX2 485 aaPredicted RBP29.8■■■□□ 2.36
PABPN1-201ENST00000216727 CCDC162PA2VCL2 907 aa29.79■■■□□ 2.36
PABPN1-201ENST00000216727 DLX3O60479 287 aa29.79■■■□□ 2.36
PABPN1-201ENST00000216727 TMCC1O94876 653 aa29.79■■■□□ 2.36
PABPN1-201ENST00000216727 PIRTP0C851 137 aa29.79■■■□□ 2.36
PABPN1-201ENST00000216727 OGNP20774 298 aaKnown RBP29.79■■■□□ 2.36
PABPN1-201ENST00000216727 ZNF140P52738 457 aaPredicted RBP29.79■■■□□ 2.36
PABPN1-201ENST00000216727 HK2P52789 917 aa29.79■■■□□ 2.36
PABPN1-201ENST00000216727 AGAP9Q5VTM2 703 aa29.79■■■□□ 2.36
PABPN1-201ENST00000216727 SUGP1Q8IWZ8 645 aaKnown RBP29.79■■■□□ 2.36
PABPN1-201ENST00000216727 FIBCD1Q8N539 461 aa29.79■■■□□ 2.36
PABPN1-201ENST00000216727 RMDN1Q96DB5 314 aa29.79■■■□□ 2.36
PABPN1-201ENST00000216727 LRRC3Q9BY71 257 aa29.79■■■□□ 2.36
PABPN1-201ENST00000216727 ILKAPQ9H0C8 392 aaPredicted RBP29.79■■■□□ 2.36
PABPN1-201ENST00000216727 BAIAP2L1Q9UHR4 511 aa29.79■■■□□ 2.36
PABPN1-201ENST00000216727 SNAP91O60641 907 aa29.79■■■□□ 2.36
PABPN1-201ENST00000216727 WISP3O95389 354 aaPredicted RBP29.79■■■□□ 2.36
PABPN1-201ENST00000216727 MZF1P28698 734 aaPredicted RBP29.79■■■□□ 2.36
PABPN1-201ENST00000216727 RCN2Q14257 317 aa29.79■■■□□ 2.36
PABPN1-201ENST00000216727 TAF1AQ15573 450 aaPredicted RBP29.79■■■□□ 2.36
PABPN1-201ENST00000216727 LONP2Q86WA8 852 aa29.79■■■□□ 2.36
PABPN1-201ENST00000216727 TREML1Q86YW5 311 aa29.79■■■□□ 2.36
PABPN1-201ENST00000216727 TMC8Q8IU68 726 aa29.79■■■□□ 2.36
PABPN1-201ENST00000216727 OR4L1Q8NH43 312 aa29.79■■■□□ 2.36
PABPN1-201ENST00000216727 GPAMQ9HCL2 828 aa29.79■■■□□ 2.36
PABPN1-201ENST00000216727 LSM7Q9UK45 103 aaKnown RBP29.79■■■□□ 2.36
PABPN1-201ENST00000216727 RAP2CQ9Y3L5 183 aa29.79■■■□□ 2.36
PABPN1-201ENST00000216727 SPO11Q9Y5K1 396 aa29.79■■■□□ 2.36
PABPN1-201ENST00000216727 RAI2Q9Y5P3 530 aa29.79■■■□□ 2.36
PABPN1-201ENST00000216727 LTA4HP09960 611 aaKnown RBP29.78■■■□□ 2.36
PABPN1-201ENST00000216727 ALDH18A1P54886 795 aaKnown RBP29.78■■■□□ 2.36
PABPN1-201ENST00000216727 SLC7A9P82251 487 aa29.78■■■□□ 2.36
PABPN1-201ENST00000216727 PTPRCAPQ14761 206 aa29.78■■■□□ 2.36
PABPN1-201ENST00000216727 FAM45BPQ6NSW5 357 aa29.78■■■□□ 2.36
PABPN1-201ENST00000216727 CCDC149Q6ZUS6 474 aa29.78■■■□□ 2.36
PABPN1-201ENST00000216727 LDB1Q86U70 411 aaPredicted RBP29.78■■■□□ 2.36
PABPN1-201ENST00000216727 SPATA6LQ8N4H0 392 aa29.78■■■□□ 2.36
PABPN1-201ENST00000216727 FAM45AQ8TCE6 357 aa29.78■■■□□ 2.36
PABPN1-201ENST00000216727 CLP1Q92989 425 aaKnown RBP29.78■■■□□ 2.36
PABPN1-201ENST00000216727 CDKN2AIPNLQ96HQ2 116 aa29.78■■■□□ 2.36
PABPN1-201ENST00000216727 MIPEPQ99797 713 aa29.78■■■□□ 2.36
PABPN1-201ENST00000216727 BUD23O43709 281 aaKnown RBP29.78■■■□□ 2.36
PABPN1-201ENST00000216727 LRG1P02750 347 aa29.78■■■□□ 2.36
PABPN1-201ENST00000216727 CSHL1Q14406 222 aa29.78■■■□□ 2.36
PABPN1-201ENST00000216727 PDCD6IPQ8WUM4 868 aaKnown RBP29.78■■■□□ 2.36
PABPN1-201ENST00000216727 CATSPERZQ9NTU4 200 aa29.78■■■□□ 2.36
PABPN1-201ENST00000216727 DNMT3BQ9UBC3 853 aaKnown RBP29.78■■■□□ 2.36
PABPN1-201ENST00000216727 VPS28Q9UK41 221 aa29.78■■■□□ 2.36
PABPN1-201ENST00000216727 ZNF510Q9Y2H8 683 aa29.78■■■□□ 2.36
PABPN1-201ENST00000216727 CA8P35219 290 aa29.77■■■□□ 2.36
PABPN1-201ENST00000216727 NAGLUP54802 743 aa29.77■■■□□ 2.36
PABPN1-201ENST00000216727 DNAJB13P59910 316 aa29.77■■■□□ 2.36
PABPN1-201ENST00000216727 TECRLQ5HYJ1 363 aa29.77■■■□□ 2.36
PABPN1-201ENST00000216727 RALGPS1Q5JS13 557 aa29.77■■■□□ 2.36
PABPN1-201ENST00000216727 EPGNQ6UW88 154 aa29.77■■■□□ 2.36
PABPN1-201ENST00000216727 LINGO4Q6UY18 593 aa29.77■■■□□ 2.36
PABPN1-201ENST00000216727 HTR3DQ70Z44 454 aa29.77■■■□□ 2.36
PABPN1-201ENST00000216727 RNF135Q8IUD6 432 aa29.77■■■□□ 2.36
PABPN1-201ENST00000216727 TDRD5Q8NAT2 981 aaKnown RBP29.77■■■□□ 2.36
PABPN1-201ENST00000216727 ALG14Q96F25 216 aa29.77■■■□□ 2.36
PABPN1-201ENST00000216727 ADGRE3Q9BY15 652 aa29.77■■■□□ 2.36
PABPN1-201ENST00000216727 RPL26L1Q9UNX3 145 aaKnown RBP29.77■■■□□ 2.36
PABPN1-201ENST00000216727 SNUPNO95149 360 aaKnown RBP29.76■■■□□ 2.36
PABPN1-201ENST00000216727 AOC1P19801 751 aa29.76■■■□□ 2.36
PABPN1-201ENST00000216727 CYP4F8P98187 520 aa29.76■■■□□ 2.36
PABPN1-201ENST00000216727 CDH18Q13634 790 aa29.76■■■□□ 2.36
PABPN1-201ENST00000216727 TYSND1Q2T9J0 566 aa29.76■■■□□ 2.36
PABPN1-201ENST00000216727 KLC3Q6P597 504 aa29.76■■■□□ 2.36
PABPN1-201ENST00000216727 NCEH1Q6PIU2 408 aa29.76■■■□□ 2.36
PABPN1-201ENST00000216727 GLT6D1Q7Z4J2 308 aa29.76■■■□□ 2.36
PABPN1-201ENST00000216727 SDCCAG8Q86SQ7 713 aaPredicted RBP29.76■■■□□ 2.36
PABPN1-201ENST00000216727 PNPLA1Q8N8W4 532 aa29.76■■■□□ 2.36
PABPN1-201ENST00000216727 DCAF4L2Q8NA75 395 aa29.76■■■□□ 2.36
PABPN1-201ENST00000216727 COG4Q9H9E3 785 aa29.76■■■□□ 2.36
PABPN1-201ENST00000216727 LHX3Q9UBR4 397 aa29.76■■■□□ 2.36
PABPN1-201ENST00000216727 DENND4CQ5VZ89 1909 aa29.76■■■□□ 2.35
PABPN1-201ENST00000216727 SCAMP3O14828 347 aaKnown RBP29.76■■■□□ 2.35
PABPN1-201ENST00000216727 ADH1AP07327 375 aa29.76■■■□□ 2.35
PABPN1-201ENST00000216727 PDHA1P08559 390 aa29.76■■■□□ 2.35
PABPN1-201ENST00000216727 RBP1P09455 135 aa29.76■■■□□ 2.35
PABPN1-201ENST00000216727 ATP5F1P24539 256 aaPredicted RBP29.76■■■□□ 2.35
PABPN1-201ENST00000216727 CDKN2DP55273 166 aa29.76■■■□□ 2.35
PABPN1-201ENST00000216727 USP4Q13107 963 aa29.76■■■□□ 2.35
PABPN1-201ENST00000216727 PRKAA1Q13131 559 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms