RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 WDR60Q8WVS4 1066 aa8.3□□□□□ -1.08
VAMP3-201ENST00000054666 FAR2Q96K12 515 aa8.3□□□□□ -1.08
VAMP3-201ENST00000054666 PPP1R36Q96LQ0 422 aa8.3□□□□□ -1.08
VAMP3-201ENST00000054666 TBATAQ96M53 351 aa8.3□□□□□ -1.08
VAMP3-201ENST00000054666 PRICKLE1Q96MT3 831 aaPredicted RBP8.3□□□□□ -1.08
VAMP3-201ENST00000054666 PSKH2Q96QS6 385 aa8.3□□□□□ -1.08
VAMP3-201ENST00000054666 OR52B2Q96RD2 323 aa8.3□□□□□ -1.08
VAMP3-201ENST00000054666 CCDC28BQ9BUN5 200 aa8.3□□□□□ -1.08
VAMP3-201ENST00000054666 MUC3BQ9H195 1237 aa8.3□□□□□ -1.08
VAMP3-201ENST00000054666 SCUBE2Q9NQ36 999 aa8.3□□□□□ -1.08
VAMP3-201ENST00000054666 MRGBPQ9NV56 204 aa8.3□□□□□ -1.08
VAMP3-201ENST00000054666 RIMKLBQ9ULI2 386 aa8.3□□□□□ -1.08
VAMP3-201ENST00000054666 ARHGAP26Q9UNA1 814 aa8.3□□□□□ -1.08
VAMP3-201ENST00000054666 ARIH1Q9Y4X5 557 aaPredicted RBP8.3□□□□□ -1.08
VAMP3-201ENST00000054666 ARL5AQ9Y689 179 aa8.3□□□□□ -1.08
VAMP3-201ENST00000054666 OR51F1A6NGY5 319 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 A8MT66 165 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 VGLL3A8MV65 326 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 PRRG1O14668 218 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 MUSKO15146 869 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 CD3EAPO15446 510 aaKnown RBP8.29□□□□□ -1.08
VAMP3-201ENST00000054666 INSIG1O15503 277 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 KDELR3O43731 214 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 STC2O76061 302 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 IPO13O94829 963 aaKnown RBP8.29□□□□□ -1.08
VAMP3-201ENST00000054666 GOT2P00505 430 aaKnown RBP8.29□□□□□ -1.08
VAMP3-201ENST00000054666 SLC4A1P02730 911 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 URODP06132 367 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 COX4I1P13073 169 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 TFEBP19484 476 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 CES1P23141 567 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 ELF1P32519 619 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 PPARGP37231 505 aaPredicted RBP8.29□□□□□ -1.08
VAMP3-201ENST00000054666 VHLP40337 213 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 PPP3CCP48454 512 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 SCNN1BP51168 640 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 APLP1P51693 650 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 SLC25A3Q00325 362 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 PFKPQ01813 784 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 ACVR1Q04771 509 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 KLF10Q13118 480 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 ZNF789Q5FWF6 425 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 SH2D4BQ5SQS7 431 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 CNKSR3Q6P9H4 555 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 RIPOR1Q6ZS17 1223 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 GLT6D1Q7Z4J2 308 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 HERC6Q8IVU3 1022 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 PPFIBP2Q8ND30 876 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 ZNF461Q8TAF7 563 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 RMDN1Q96DB5 314 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 CNDP1Q96KN2 507 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 ZNF558Q96NG5 402 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 SHCBP1LQ9BZQ2 653 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 CCDC68Q9H2F9 335 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 CWH43Q9H720 699 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 PAK6Q9NQU5 681 aaPredicted RBP8.29□□□□□ -1.08
VAMP3-201ENST00000054666 STX18Q9P2W9 335 aaKnown RBP8.29□□□□□ -1.08
VAMP3-201ENST00000054666 SLC7A8Q9UHI5 535 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 ZDHHC2Q9UIJ5 367 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 SSX2IPQ9Y2D8 614 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 CHD5Q8TDI0 1954 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 C2orf81A6NN90 581 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 CBX4O00257 560 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 PFDN6O15212 129 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 SMIM24O75264 130 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 GJB3O75712 270 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 S1PR4O95977 384 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 THRAP10827 490 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 HMGA1P17096 107 aaKnown RBP8.29□□□□□ -1.08
VAMP3-201ENST00000054666 GLDCP23378 1020 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 EPHA3P29320 983 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 ADSLP30566 484 aaPredicted RBP8.29□□□□□ -1.08
VAMP3-201ENST00000054666 CPOXP36551 454 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 CCR10P46092 362 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 ACTR3P61158 418 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 AP2B1P63010 937 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 SLC34A1Q06495 639 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 NSUN2Q08J23 767 aaKnown RBP eCLIP8.29□□□□□ -1.08
VAMP3-201ENST00000054666 IHHQ14623 411 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 LSM12Q3MHD2 195 aaKnown RBP8.29□□□□□ -1.08
VAMP3-201ENST00000054666 ADGRF1Q5T601 910 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 AFTPHQ6ULP2 937 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.29□□□□□ -1.08
VAMP3-201ENST00000054666 ANKRD33Q7Z3H0 272 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 LDB1Q86U70 411 aaPredicted RBP8.29□□□□□ -1.08
VAMP3-201ENST00000054666 RNF168Q8IYW5 571 aaPredicted RBP8.29□□□□□ -1.08
VAMP3-201ENST00000054666 PHTF2Q8N3S3 785 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 GPR150Q8NGU9 434 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 OR4L1Q8NH43 312 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 JADE3Q92613 823 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 N4BP2L2Q92802 583 aaPredicted RBP8.29□□□□□ -1.08
VAMP3-201ENST00000054666 TRMT2BQ96GJ1 504 aaKnown RBP8.29□□□□□ -1.08
VAMP3-201ENST00000054666 CLPTM1LQ96KA5 538 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 EXOC2Q96KP1 924 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 MYRFLQ96LU7 910 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 RTKNQ9BST9 563 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 RNF208Q9H0X6 261 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 WDR55Q9H6Y2 383 aaPredicted RBP8.29□□□□□ -1.08
VAMP3-201ENST00000054666 CYP4F12Q9HCS2 524 aa8.29□□□□□ -1.08
VAMP3-201ENST00000054666 ACSS2Q9NR19 701 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms