RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 HDAC3O15379 428 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 CABYRO75952 493 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 OAZ2O95190 189 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 PABPC4LP0CB38 370 aaKnown RBP13.2□□□□□ -0.3
CTNS-201ENST00000046640 ALOX15P16050 662 aaPredicted RBP13.2□□□□□ -0.3
CTNS-201ENST00000046640 HDCP19113 662 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 SERPINH1P50454 418 aaKnown RBP13.2□□□□□ -0.3
CTNS-201ENST00000046640 RENBPP51606 427 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 DSC1Q08554 894 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 CEACAM7Q14002 265 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 UGP2Q16851 508 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 NADK2Q4G0N4 442 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 LRRC23Q53EV4 343 aaPredicted RBP13.2□□□□□ -0.3
CTNS-201ENST00000046640 MAP3K21Q5TCX8 1036 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 LAYNQ6UX15 382 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 RNF19BQ6ZMZ0 732 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 BNC2Q6ZN30 1099 aaPredicted RBP13.2□□□□□ -0.3
CTNS-201ENST00000046640 RNF180Q86T96 592 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 TMEM173Q86WV6 379 aaPredicted RBP13.2□□□□□ -0.3
CTNS-201ENST00000046640 LILRA2Q8N149 483 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 ANKRD49Q8WVL7 239 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 ITFG2Q969R8 447 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 EXOC2Q96KP1 924 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 SMIM14Q96QK8 99 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 MARCH4Q9P2E8 410 aaPredicted RBP13.2□□□□□ -0.3
CTNS-201ENST00000046640 PSMD13Q9UNM6 376 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 RAP2CQ9Y3L5 183 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 TMEM114B3SHH9 223 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 PRSS56P0CW18 603 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 THRAP10827 490 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 RPL17P18621 184 aaKnown RBP13.2□□□□□ -0.3
CTNS-201ENST00000046640 PAMP19021 973 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 CDKL1Q00532 357 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 LSAMPQ13449 338 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 POLD3Q15054 466 aaPredicted RBP13.2□□□□□ -0.3
CTNS-201ENST00000046640 KDELC1Q6UW63 502 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 PRSS55Q6UWB4 352 aaPredicted RBP13.2□□□□□ -0.3
CTNS-201ENST00000046640 TRIM67Q6ZTA4 783 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 TAS1R1Q7RTX1 841 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 SCML4Q8N228 414 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 METTL25Q8N6Q8 603 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 SLC39A13Q96H72 371 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 SEMA3CQ99985 751 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 SLC25A51Q9H1U9 297 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 TNFRSF12AQ9NP84 129 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 ARL5AQ9Y689 179 aa13.2□□□□□ -0.3
CTNS-201ENST00000046640 A0A0D9SEW6 157 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 AP3B1O00203 1094 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 MUSKO15146 869 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 HNRNPRO43390 633 aaKnown RBP13.19□□□□□ -0.3
CTNS-201ENST00000046640 SMIM18P0DKX4 95 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 PRAMEP78395 509 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 FBXO48Q5FWF7 155 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 SIRPB2Q5JXA9 342 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 C2CD4AQ8NCU7 369 aaPredicted RBP13.19□□□□□ -0.3
CTNS-201ENST00000046640 OR13J1Q8NGT2 312 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 IMP4Q96G21 291 aaKnown RBP13.19□□□□□ -0.3
CTNS-201ENST00000046640 TBATAQ96M53 351 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 CYP2S1Q96SQ9 504 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 PCDHAC1Q9H158 963 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 FBXO44Q9H4M3 255 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 WDR41Q9HAD4 459 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 NSMCE4AQ9NXX6 385 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 ANKRD6Q9Y2G4 727 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 COMMD3-BMI1R4GMX3 469 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 MYLKQ15746 1914 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 PDE4DIPQ5VU43 2346 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 A0A0U1RQS6 177 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 RGSL1A5PLK6 1076 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 TARM1B6A8C7 271 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 MMP2P08253 660 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 FRG1Q14331 258 aaKnown RBP13.19□□□□□ -0.3
CTNS-201ENST00000046640 NFE2Q16621 373 aaPredicted RBP13.19□□□□□ -0.3
CTNS-201ENST00000046640 RARS2Q5T160 578 aaKnown RBP13.19□□□□□ -0.3
CTNS-201ENST00000046640 OGFRL1Q5TC84 451 aaPredicted RBP13.19□□□□□ -0.3
CTNS-201ENST00000046640 AFMIDQ63HM1 303 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 GK5Q6ZS86 529 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 AMIGO2Q86SJ2 522 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 DBF4BQ8NFT6 615 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 OR52K2Q8NGK3 314 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 SPON2Q9BUD6 331 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 MRPL46Q9H2W6 279 aaKnown RBP13.19□□□□□ -0.3
CTNS-201ENST00000046640 FAM96AQ9H5X1 160 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 STK39Q9UEW8 545 aa13.19□□□□□ -0.3
CTNS-201ENST00000046640 RAMP2O60895 175 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 TFAP2AP05549 437 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 MYL4P12829 197 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 KCNC1P48547 511 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 INHBCP55103 352 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 ZNF33AQ06730 810 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 RTP2Q5QGT7 225 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 GPR158Q5T848 1215 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 TRAF7Q6Q0C0 670 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 BEND5Q7L4P6 421 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 KLHL32Q96NJ5 620 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 SERPINI1Q99574 410 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 ALG9Q9H6U8 611 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 HEMK1Q9Y5R4 338 aaPredicted RBP13.18□□□□□ -0.3
CTNS-201ENST00000046640 NLRC5Q86WI3 1866 aa13.18□□□□□ -0.3
CTNS-201ENST00000046640 ATP6AP2A0A1C7CYW4 349 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms