RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 PrtgQ2EY15 1191 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Mat2aQ3THS6 395 aaKnown RBP12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Scrn3Q3TMH2 418 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Pank2Q3U4S0 443 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Nxf2Q4ZGD8 691 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Ccdc42Q5SV66 316 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 DgkbQ6NS52 802 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Oxsr1Q6P9R2 527 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Olfr309Q7TS01 308 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Ccdc40Q8BI79 1192 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Pak4Q8BTW9 593 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Ttc34Q8C0Q3 554 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 CenpuQ8C4M7 410 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Epn2Q8CHU3 595 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Tceal3Q8R0A5 200 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Chchd4Q8VEA4 139 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Olfr665Q8VG79 316 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Imp4Q8VHZ7 291 aaKnown RBP12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Acsl6Q91WC3 697 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Ogfod2Q9CQ04 349 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Bzw1Q9CQC6 419 aaKnown RBP12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Otub2Q9CQX0 234 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 XpotQ9CRT8 963 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Arl2Q9D0J4 184 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Spata17Q9D552 379 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Fam83dQ9D7I8 585 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Anxa9Q9JHQ0 345 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Cyb561d2Q9WUE3 222 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 LipgQ9WVG5 500 aa12.2□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Dchs2A0A0A6YW72 3346 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Igkv12-46A0A140T8P6 115 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 A0A286YDP4 300 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Adgrf2E9Q4J9 644 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Nccrp1G3X9C2 266 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Mroh9G5E8L9 891 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 MntO08789 591 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Fgf15O35622 218 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Sp3O70494 783 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Shoc2O88520 582 aaKnown RBP12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 P01679 107 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Mtnd3P03899 115 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Sod1P08228 154 aaKnown RBP12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Tagap1P0CAX8 505 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Cd44P15379 778 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 PpiaP17742 164 aaKnown RBP12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 FshrP35378 692 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Krt86P97861 486 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Gtpbp2Q3UJK4 602 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Esrp1Q3US41 680 aaKnown RBP12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Fgfr1opQ66JX5 399 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Methig1Q76I26 264 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Rpp38Q80UU2 280 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Lrrc8aQ80WG5 810 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Vmn2r43Q80Z08 845 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 LssQ8BLN5 733 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Arrb1Q8BWG8 418 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 P3h2Q8CG71 703 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Cwf19l1Q8CI33 537 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 FdpsQ920E5 353 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Nrif1Q923B3 828 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Satl1Q9D5N8 744 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Glipr1l1Q9DAG6 236 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 NagaQ9QWR8 415 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 QkiQ9QYS9 341 aaKnown RBP12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Akap8lQ9R0L7 642 aaKnown RBP12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Adam24Q9R160 761 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Rps6kb2Q9Z1M4 485 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Cfap46E9Q2C0 2641 aa12.19□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 AcacbE9Q4Z2 2448 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Gm21964A0A1W2P7S4 437 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Ssc4dA1L0T3 586 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Slfn8B1ARD8 910 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 AU015836B2RUM3 263 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Ccnyl1D3YUJ3 367 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Ctbp1O88712 441 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Klkb1P26262 638 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Cxcr2P35343 359 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Pdha1P35486 390 aaKnown RBP12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Klk1b26P36369 261 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Ighmbp2P40694 993 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Opa1P58281 960 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 B3gntl1Q3U129 357 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Tfdp2Q64163 446 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Lingo3Q6GQU6 589 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Galnt10Q6P9S7 603 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Med16Q6PGF3 828 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Rnaseh2bQ80ZV0 308 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Tmtc4Q8BG19 741 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Rbm22Q8BHS3 420 aaKnown RBP12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Mterf2Q8BKY8 385 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 LipmQ8K2A6 422 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 ZwilchQ8R060 589 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Olfr97Q8VFE1 310 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Ubap2Q91VX2 1132 aaKnown RBP12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Slc39a3Q99K24 317 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Cyp4f15Q99N18 534 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Thumpd2Q9CZB3 528 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Sp2Q9D2H6 612 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Tnfsf14Q9QYH9 239 aa12.18□□□□□ -0.46
Ccdc28a-202ENSMUST00000080860 Magel2Q9QZ04 1284 aa12.18□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms