RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 SvopQ8BFT9 548 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gspt1Q8R050 636 aaKnown RBP9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Crtc3Q91X84 619 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Rmnd5bQ91YQ7 393 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tmco1Q921L3 188 aaKnown RBP9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 DdoQ922Z0 341 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Wdr89Q9D0R9 386 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Fam83dQ9D7I8 585 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Smad9Q9JIW5 430 aa9.85□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm3147A0A0J9YU88 481 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm10424A0A0J9YVD0 481 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Nfx1B1AY10 1114 aaKnown RBP9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 F830016B08RikG3UWE2 416 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm7971J3QMM8 481 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Vmn2r1O70410 912 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Dync1i2O88487 612 aaKnown RBP9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Prox1P48437 737 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 AdslP54822 484 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Col28a1Q2UY11 1141 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 TceancQ3US16 359 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Akr1clQ3UXL1 322 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Krt73Q6NXH9 539 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tmem130Q6NXM3 419 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Dhx33Q80VY9 698 aaKnown RBP9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Pcdh20Q8BIZ0 952 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Mtrf1lQ8BJU9 373 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Arhgap28Q8BN58 729 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Vps26bQ8C0E2 336 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Dclre1cQ8K4J0 705 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Them5Q9CQJ0 248 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Retreg3Q9CQV4 466 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 IsxA1A546 240 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tmem233D3Z1U7 110 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm21293E9Q4G9 266 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Adam19O35674 920 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Sh3pxd2aO89032 1124 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Krt4P07744 525 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Impdh2P24547 514 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Stt3aP46978 705 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Defa8P50706 81 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 NadkP58058 439 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 SirpaP97797 513 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Larp7Q05CL8 570 aaKnown RBP9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Vps51Q3UVL4 782 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Rab26Q504M8 260 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Afap1l2Q5DTU0 825 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Mief2Q5NCS9 454 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 MafkQ61827 156 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Suz12Q80U70 741 aaKnown RBP9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tmcc2Q80W04 706 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Arhgap11aQ80Y19 987 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Nipal1Q8BMW7 416 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tdrd7Q8K1H1 1086 aaKnown RBP9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Il31raQ8K5B1 716 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Timd2Q8R183 305 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Rsl24d1Q99L28 163 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Nck1Q99M51 377 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Lrrc4Q99PH1 652 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Efcab9Q9DAM2 216 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Akr1e2Q9DCT1 301 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Nt5cQ9JM14 200 aa9.84□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Klhl18A0A0G2JGN5 579 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Olfr1145A2AVC7 325 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 BhmtO35490 407 aaKnown RBP9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Cd151O35566 253 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Per3O70361 1113 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Tgm2P21981 686 aaKnown RBP9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 RxrgP28705 463 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Slc2a3P32037 493 aaKnown RBP9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Dpf3P58269 378 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 1700061G19RikQ08EE8 705 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gpr15Q0VDU3 360 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gsdmc2Q2KHK6 480 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Sec31bQ3TZ89 1158 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 BtrcQ3ULA2 605 aaKnown RBP9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Osbp2Q5QNQ6 908 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Hspa1aQ61696 641 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Mef2dQ63943 514 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 XpaQ64267 272 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Olfr698Q7TRN4 311 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Ccdc116Q80X53 541 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Amigo1Q80ZD8 492 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gsdmc3Q8CB12 480 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Spdye4bQ8CDE8 236 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Acsm2Q8K0L3 575 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 OptcQ920A0 328 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Pbld2Q9CXN7 288 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 TcimQ9D915 106 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Q9D9D9 101 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 ThadaA8C756 1938 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Ptchd4B9EKX1 904 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Pou4f1P17208 421 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Agtr2P35374 363 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gdf6P43028 454 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Brcc3P46737 291 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Rpl36P47964 105 aaKnown RBP9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Ppp3cbP48453 525 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 TubP50586 505 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 GemP55041 295 aa9.83□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Stx1bP61264 288 aa9.83□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms