RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Tfap2dQ91ZK0 452 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Mto1Q923Z3 669 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Efhc2Q9D485 750 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Nwd1A6H603 1563 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 TankP70347 448 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Ipcef1Q5DU31 406 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 HnrnplQ8R081 586 aaKnown RBP16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Cfap44E9Q5M6 1843 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 JhyE9Q793 770 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Mdm4O35618 489 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Cd36Q08857 472 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 DaglaQ6WQJ1 1044 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Fbxo30Q8BJL1 746 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Gm10134F6ZQC6 126 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Kpna3O35344 521 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Dpp10Q6NXK7 797 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Fbxo38Q8BMI0 1194 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Fmo2Q8K2I3 535 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 WarsP32921 481 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Klra2Q60660 288 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Fbxo10Q7TQF2 950 aa16.65■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Slfn8B1ARD8 910 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Arhgap36B1AUC7 590 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 AmhP27106 555 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 MipP51180 263 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Pik3r6Q3U6Q4 756 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 NarfQ9CYQ7 462 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ppil2Q9D787 521 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Fam131aQ8BWU3 361 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Impg1Q8R1W8 798 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Emc3Q99KI3 261 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Glipr1l1Q9DAG6 236 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Srbd1Q497V5 1015 aaKnown RBP16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Nr2f1Q60632 422 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gpatch2lQ6PE65 482 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Arhgap11aQ80Y19 987 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Vps9d1Q8C190 649 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Lrrc4Q99PH1 652 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Fam171a1A2ATK9 892 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gm5849J3QPE5 117 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Adora2bQ60614 332 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Sema3cQ62181 751 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Grik4Q8BMF5 956 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 GneQ91WG8 722 aaKnown RBP16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Rilpl2Q99LE1 197 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Mtfr1Q99MB2 328 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Slc26a3Q9WVC8 757 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Igf2bp1O88477 577 aaKnown RBP16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Slc2a2P14246 523 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Dnajb14Q149L6 379 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Hectd3Q3U487 861 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Klhl25Q8R2P1 589 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 LiasQ99M04 373 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Atp6ap1Q9R1Q9 463 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 HunkO88866 714 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Tdrd12Q9CWU0 1215 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ddx59Q9DBN9 619 aa16.64■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Btnl6A2CG22 539 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Fbxw9F8VPX2 458 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 H2-Q1O19441 368 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 SelpQ01102 768 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Col28a1Q2UY11 1141 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ezh2Q61188 746 aaKnown RBP16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ca4Q64444 305 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Dpy19l3Q71B07 716 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Q810M1 233 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 D3Ertd751eQ8BGN2 192 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Wdr26Q8C6G8 641 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ergic2Q9CR89 377 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Slc28a3Q9ERH8 703 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gm4307E9PZY4 289 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Hmgcs2P54869 508 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Cdh9P70407 786 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Prr7Q3V0I2 269 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gpr65Q61038 337 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Olfr792Q7TRH9 311 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Samd14Q8K070 417 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 PigxQ99LV7 254 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Pramel1Q99MW3 458 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Decr1Q9CQ62 335 aaKnown RBP16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Tubgcp6G5E8P0 1769 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 4933424G06RikA0A140LIP3 267 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ndufaf6A2AIL4 333 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Gm29394H3BIW7 199 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Cbfa2t3O54972 620 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Htr5bP31387 370 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Epb42P49222 691 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Vps51Q3UVL4 782 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Slc9b2Q5BKR2 547 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Zswim6Q80TB7 1207 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Mrps7Q80X85 242 aaKnown RBP16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Trappc5Q9CQA1 188 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ric1Q69ZJ7 1422 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ism2D3Z6A3 493 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Tal1P22091 329 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Rgs14P97492 547 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 IfneQ80ZF2 192 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Zbtb46Q8BID6 600 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 Ccdc184Q8BMK5 191 aa16.63■□□□□ 0.25
Ccdc88a-201ENSMUST00000040182 FggQ8VCM7 436 aa16.63■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms