RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 DDX56Q9NY93 547 aaKnown RBP15.14■□□□□ 0.01
PHGDH-231ENST00000641939 FTSJ1Q9UET6 329 aa15.14■□□□□ 0.01
PHGDH-231ENST00000641939 HYOU1Q9Y4L1 999 aa15.14■□□□□ 0.01
PHGDH-231ENST00000641939 PCDHGC4Q9Y5F7 938 aa15.14■□□□□ 0.01
PHGDH-231ENST00000641939 EPN1Q9Y6I3 576 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-231ENST00000641939 AKAP13Q12802 2813 aa15.14■□□□□ 0.01
PHGDH-231ENST00000641939 IGF2RP11717 2491 aa15.14■□□□□ 0.01
PHGDH-231ENST00000641939 A0A0A6YYK5 440 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-231ENST00000641939 SPTY2D1-AS1A0A0U1RR47 76 aa15.13■□□□□ 0.01
PHGDH-231ENST00000641939 A0A1W2PQ67 120 aa15.13■□□□□ 0.01
PHGDH-231ENST00000641939 CFAP69A5D8W1 941 aa15.13■□□□□ 0.01
PHGDH-231ENST00000641939 SOWAHDA6NJG2 315 aa15.13■□□□□ 0.01
PHGDH-231ENST00000641939 MATN3O15232 486 aa15.13■□□□□ 0.01
PHGDH-231ENST00000641939 HTRA2O43464 458 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-231ENST00000641939 HYAL3O43820 417 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-231ENST00000641939 SDC3O75056 442 aa15.13■□□□□ 0.01
PHGDH-231ENST00000641939 TOP3BO95985 862 aaKnown RBP15.13■□□□□ 0.01
PHGDH-231ENST00000641939 PRKCGP05129 697 aa15.13■□□□□ 0.01
PHGDH-231ENST00000641939 ATXN1LP0C7T5 689 aaKnown RBP15.13■□□□□ 0.01
PHGDH-231ENST00000641939 C6P13671 934 aa15.13■□□□□ 0.01
PHGDH-231ENST00000641939 TNNT1P13805 278 aa15.13■□□□□ 0.01
PHGDH-231ENST00000641939 COMTP21964 271 aa15.13■□□□□ 0.01
PHGDH-231ENST00000641939 IGFALSP35858 605 aa15.13■□□□□ 0.01
PHGDH-231ENST00000641939 SLC10A2Q12908 348 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-231ENST00000641939 FZD2Q14332 565 aa15.13■□□□□ 0.01
PHGDH-231ENST00000641939 RAB44Q7Z6P3 723 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-231ENST00000641939 SLCO6A1Q86UG4 719 aa15.13■□□□□ 0.01
PHGDH-231ENST00000641939 EID2Q8N6I1 236 aa15.13■□□□□ 0.01
PHGDH-231ENST00000641939 PNPLA1Q8N8W4 532 aa15.13■□□□□ 0.01
PHGDH-231ENST00000641939 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-231ENST00000641939 PDCD6IPQ8WUM4 868 aaKnown RBP15.13■□□□□ 0.01
PHGDH-231ENST00000641939 ADAMTS14Q8WXS8 1223 aa15.13■□□□□ 0.01
PHGDH-231ENST00000641939 SPOCK2Q92563 424 aa15.13■□□□□ 0.01
PHGDH-231ENST00000641939 ZNF830Q96NB3 372 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-231ENST00000641939 SCNM1Q9BWG6 230 aa15.13■□□□□ 0.01
PHGDH-231ENST00000641939 MAK16Q9BXY0 300 aaKnown RBP15.13■□□□□ 0.01
PHGDH-231ENST00000641939 TOR4AQ9NXH8 423 aa15.13■□□□□ 0.01
PHGDH-231ENST00000641939 DTLQ9NZJ0 730 aa15.13■□□□□ 0.01
PHGDH-231ENST00000641939 COQ6Q9Y2Z9 468 aa15.13■□□□□ 0.01
PHGDH-231ENST00000641939 WDFY3Q8IZQ1 3526 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 TOR1BO14657 336 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 LZTS3O60299 673 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-231ENST00000641939 NDUFA10O95299 355 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 LDOC1O95751 146 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-231ENST00000641939 SPINK2P20155 84 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 DGKAP23743 735 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 LIG3P49916 1009 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 PFN3P60673 137 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 YPEL5P62699 121 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 SEMG2Q02383 582 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 ITKQ08881 620 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 PDE1CQ14123 709 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-231ENST00000641939 LRRC14Q15048 493 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 AGERQ15109 404 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 IRF4Q15306 451 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 SLC9A4Q6AI14 798 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 PARGQ86W56 976 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 CHCHD4Q8N4Q1 142 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 PLD5Q8N7P1 536 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 TP53I13Q8NBR0 393 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-231ENST00000641939 CCNYQ8ND76 341 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 RNF25Q96BH1 459 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-231ENST00000641939 HDAC11Q96DB2 347 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 CNDP2Q96KP4 475 aaKnown RBP15.12■□□□□ 0.01
PHGDH-231ENST00000641939 CNTNAP3BQ96NU0 1288 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 CNTNAP3Q9BZ76 1288 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 POLR1EQ9GZS1 481 aaKnown RBP15.12■□□□□ 0.01
PHGDH-231ENST00000641939 MBNL1Q9NR56 388 aaKnown RBP15.12■□□□□ 0.01
PHGDH-231ENST00000641939 HAUS2Q9NVX0 235 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 RBM22Q9NW64 420 aaKnown RBP eCLIP15.12■□□□□ 0.01
PHGDH-231ENST00000641939 DNAJC28Q9NX36 388 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 AMACRQ9UHK6 382 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 TFR2Q9UP52 801 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 ALG6Q9Y672 507 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 FRYQ5TBA9 3013 aa15.12■□□□□ 0.01
PHGDH-231ENST00000641939 PLXNB3Q9ULL4 1909 aa15.11■□□□□ 0.01
PHGDH-231ENST00000641939 GOLGA8CPA6NN73 597 aa15.11■□□□□ 0.01
PHGDH-231ENST00000641939 APOL1O14791 398 aa15.11■□□□□ 0.01
PHGDH-231ENST00000641939 PSTPIP1O43586 416 aa15.11■□□□□ 0.01
PHGDH-231ENST00000641939 PIAS2O75928 621 aa15.11■□□□□ 0.01
PHGDH-231ENST00000641939 NEBLO76041 1014 aa15.11■□□□□ 0.01
PHGDH-231ENST00000641939 DKK1O94907 266 aa15.11■□□□□ 0.01
PHGDH-231ENST00000641939 IPO7O95373 1038 aaKnown RBP15.11■□□□□ 0.01
PHGDH-231ENST00000641939 CPP00450 1065 aa15.11■□□□□ 0.01
PHGDH-231ENST00000641939 ELFN1P0C7U0 828 aa15.11■□□□□ 0.01
PHGDH-231ENST00000641939 CCNB1P14635 433 aa15.11■□□□□ 0.01
PHGDH-231ENST00000641939 ZFXP17010 805 aaPredicted RBP15.11■□□□□ 0.01
PHGDH-231ENST00000641939 CES1P23141 567 aa15.11■□□□□ 0.01
PHGDH-231ENST00000641939 NFKBIAP25963 317 aa15.11■□□□□ 0.01
PHGDH-231ENST00000641939 CDC25BP30305 580 aa15.11■□□□□ 0.01
PHGDH-231ENST00000641939 THOP1P52888 689 aa15.11■□□□□ 0.01
PHGDH-231ENST00000641939 HNRNPKP61978 463 aaKnown RBP eCLIP15.11■□□□□ 0.01
PHGDH-231ENST00000641939 TRAF2Q12933 501 aa15.11■□□□□ 0.01
PHGDH-231ENST00000641939 RALGDSQ12967 914 aa15.11■□□□□ 0.01
PHGDH-231ENST00000641939 WSCD2Q2TBF2 565 aa15.11■□□□□ 0.01
PHGDH-231ENST00000641939 ZNF542PQ5EBM4 170 aa15.11■□□□□ 0.01
PHGDH-231ENST00000641939 TPRG1LQ5T0D9 272 aa15.11■□□□□ 0.01
PHGDH-231ENST00000641939 ALG1LQ6GMV1 187 aa15.11■□□□□ 0.01
PHGDH-231ENST00000641939 C11orf63Q6NUN7 778 aa15.11■□□□□ 0.01
PHGDH-231ENST00000641939 LIPIQ6XZB0 460 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms