RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 ATXN7L2Q5T6C5 722 aaPredicted RBP8.92□□□□□ -0.98
PHGDH-219ENST00000641513 MROH9Q5TGP6 573 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 PDPK2PQ6A1A2 396 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 ESRP1Q6NXG1 681 aaKnown RBP8.92□□□□□ -0.98
PHGDH-219ENST00000641513 PACS1Q6VY07 963 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 CCDC91Q7Z6B0 441 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 TMEM135Q86UB9 458 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 LPCAT1Q8NF37 534 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 ST13P5Q8NFI4 369 aaPredicted RBP8.92□□□□□ -0.98
PHGDH-219ENST00000641513 GDAP1Q8TB36 358 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 BLOC1S5Q8TDH9 187 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 ACDQ96AP0 544 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 OTUB2Q96DC9 234 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 ALG14Q96F25 216 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 KIFC1Q9BW19 673 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 TM6SF2Q9BZW4 377 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 IQCGQ9H095 443 aaKnown RBP8.92□□□□□ -0.98
PHGDH-219ENST00000641513 ECT2Q9H8V3 914 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 LHX3Q9UBR4 397 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 LNPEPQ9UIQ6 1025 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 CDH22Q9UJ99 828 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 PHTF1Q9UMS5 762 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 PCDHGC4Q9Y5F7 938 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 OR51B4Q9Y5P0 310 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 RAI2Q9Y5P3 530 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 CEP290O15078 2479 aa8.92□□□□□ -0.98
PHGDH-219ENST00000641513 ZCWPW2A0A1B0GU75 182 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 LOC285095A0A1B0GVY8 99 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 K7ERQ8 282 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 DNAJC6O75061 913 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 VAPBO95292 243 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 CD160O95971 181 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 IGSF6O95976 241 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 C1QAP02745 245 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 ATXN1LP0C7T5 689 aaKnown RBP8.91□□□□□ -0.98
PHGDH-219ENST00000641513 PIRTP0C851 137 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 PYGBP11216 843 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 PABPC1P11940 636 aaKnown RBP8.91□□□□□ -0.98
PHGDH-219ENST00000641513 TCF3P15923 654 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 RPA3P35244 121 aaPredicted RBP8.91□□□□□ -0.98
PHGDH-219ENST00000641513 GP5P40197 560 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 CTSOP43234 321 aaPredicted RBP8.91□□□□□ -0.98
PHGDH-219ENST00000641513 ETV4P43268 484 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 GTF2A1P52655 376 aaPredicted RBP8.91□□□□□ -0.98
PHGDH-219ENST00000641513 EPHB1P54762 984 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 TMPRSS15P98073 1019 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 PDE1BQ01064 536 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 HYAL1Q12794 435 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 LAMB3Q13751 1172 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 FRG1Q14331 258 aaKnown RBP8.91□□□□□ -0.98
PHGDH-219ENST00000641513 IHHQ14623 411 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 FAM78AQ5JUQ0 283 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 TSTD2Q5T7W7 516 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 TRIM68Q6AZZ1 485 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 ALG1LQ6GMV1 187 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 ANKRD54Q6NXT1 300 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 SH2D5Q6ZV89 423 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 STRA8Q7Z7C7 330 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 GPR149Q86SP6 731 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 NPAS3Q8IXF0 933 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 FITM2Q8N6M3 262 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 EFHBQ8N7U6 833 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 ZNF557Q8N988 423 aaPredicted RBP8.91□□□□□ -0.98
PHGDH-219ENST00000641513 OR6K2Q8NGY2 324 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 GABPB2Q8TAK5 448 aaPredicted RBP8.91□□□□□ -0.98
PHGDH-219ENST00000641513 BPIFB1Q8TDL5 484 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 PTCD2Q8WV60 388 aaKnown RBP8.91□□□□□ -0.98
PHGDH-219ENST00000641513 C10orf82Q8WW14 230 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 FGF13Q92913 245 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 SMARCD2Q92925 531 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 TADA1Q96BN2 335 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 KLHL29Q96CT2 875 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 ATXN7L3BQ96GX2 97 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 SERAC1Q96JX3 654 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 RPL10LQ96L21 214 aaKnown RBP8.91□□□□□ -0.98
PHGDH-219ENST00000641513 ZNF778Q96MU6 729 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 LRRC37BQ96QE4 947 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 RANBP9Q96S59 729 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 AGAP2Q99490 1192 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 CPNE1Q99829 537 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 SIKE1Q9BRV8 207 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 ADGRE3Q9BY15 652 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 TNKS2Q9H2K2 1166 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 ARNT2Q9HBZ2 717 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 MRM3Q9HC36 420 aaKnown RBP8.91□□□□□ -0.98
PHGDH-219ENST00000641513 NSMCE4AQ9NXX6 385 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 SLC2A6Q9UGQ3 507 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 EVLQ9UI08 416 aaPredicted RBP8.91□□□□□ -0.98
PHGDH-219ENST00000641513 ARIH1Q9Y4X5 557 aaPredicted RBP8.91□□□□□ -0.98
PHGDH-219ENST00000641513 TICRRQ7Z2Z1 1910 aa8.91□□□□□ -0.98
PHGDH-219ENST00000641513 ZNF106Q9H2Y7 1883 aaKnown RBP8.91□□□□□ -0.98
PHGDH-219ENST00000641513 HEPACAM2A8MVW5 462 aa8.9□□□□□ -0.98
PHGDH-219ENST00000641513 COPEO14579 308 aa8.9□□□□□ -0.98
PHGDH-219ENST00000641513 SMAD6O43541 496 aaKnown RBP8.9□□□□□ -0.98
PHGDH-219ENST00000641513 BUD23O43709 281 aaKnown RBP8.9□□□□□ -0.98
PHGDH-219ENST00000641513 GLP2RO95838 553 aa8.9□□□□□ -0.98
PHGDH-219ENST00000641513 ADH1CP00326 375 aa8.9□□□□□ -0.98
PHGDH-219ENST00000641513 PENKP01210 267 aaPredicted RBP8.9□□□□□ -0.98
PHGDH-219ENST00000641513 EPOP01588 193 aa8.9□□□□□ -0.98
PHGDH-219ENST00000641513 PRKCGP05129 697 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms