RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 IFT43Q96FT9 208 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 TSPAN17Q96FV3 270 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 FEM1CQ96JP0 617 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 MARCH4Q9P2E8 410 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-211ENST00000641213 DNMT3LQ9UJW3 386 aa17.17■□□□□ 0.34
PHGDH-211ENST00000641213 A0A0D9SEW6 157 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 NEMP2A6NFY4 417 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 OR51F1A6NGY5 319 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 ACSL4O60488 711 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 GNRH1P01148 92 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 LTA4HP09960 611 aaKnown RBP17.16■□□□□ 0.34
PHGDH-211ENST00000641213 CCDC166P0CW27 439 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 ITGAXP20702 1163 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 ATP5C1P36542 298 aaKnown RBP17.16■□□□□ 0.34
PHGDH-211ENST00000641213 CLNS1AP54105 237 aaKnown RBP17.16■□□□□ 0.34
PHGDH-211ENST00000641213 CUL3Q13618 768 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 AGAP9Q5VTM2 703 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 LRRC74BQ6ZQY2 392 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 TRIM67Q6ZTA4 783 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 RNF135Q8IUD6 432 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 SLAIN1Q8ND83 568 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 ACTRT2Q8TDY3 377 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 STON2Q8WXE9 905 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 UBXN10Q96LJ8 280 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 NMRK1Q9NWW6 199 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 NCKIPSDQ9NZQ3 722 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 VWA7Q9Y334 891 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 WASF2Q9Y6W5 498 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 PITPNM1O00562 1244 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 NVLO15381 856 aaKnown RBP17.16■□□□□ 0.34
PHGDH-211ENST00000641213 CCNT2O60583 730 aaKnown RBP17.16■□□□□ 0.34
PHGDH-211ENST00000641213 JUNP05412 331 aaKnown RBP17.16■□□□□ 0.34
PHGDH-211ENST00000641213 HLA-DPA1P20036 260 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 PFKPQ01813 784 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 ACVR1Q04771 509 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 BTKQ06187 659 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 NSUN2Q08J23 767 aaKnown RBP eCLIP17.16■□□□□ 0.34
PHGDH-211ENST00000641213 CMPK2Q5EBM0 449 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 PGM2L1Q6PCE3 622 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 PIWIL4Q7Z3Z4 852 aaKnown RBP17.16■□□□□ 0.34
PHGDH-211ENST00000641213 KDM1BQ8NB78 822 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 DNAJC9Q8WXX5 260 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 ZNF333Q96JL9 665 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 CNDP1Q96KN2 507 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 ZNF599Q96NL3 588 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 LENG8Q96PV6 779 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-211ENST00000641213 RTKNQ9BST9 563 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 SUDS3Q9H7L9 328 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-211ENST00000641213 GPAMQ9HCL2 828 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 SSX2IPQ9Y2D8 614 aa17.16■□□□□ 0.34
PHGDH-211ENST00000641213 GJB5O95377 273 aa17.15■□□□□ 0.34
PHGDH-211ENST00000641213 FGF1P05230 155 aa17.15■□□□□ 0.34
PHGDH-211ENST00000641213 CD1EP15812 388 aa17.15■□□□□ 0.34
PHGDH-211ENST00000641213 ATP6V1C1P21283 382 aa17.15■□□□□ 0.34
PHGDH-211ENST00000641213 HOXD9P28356 352 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-211ENST00000641213 SERPINB5P36952 375 aa17.15■□□□□ 0.34
PHGDH-211ENST00000641213 ERFP50548 548 aa17.15■□□□□ 0.34
PHGDH-211ENST00000641213 BTG3Q14201 252 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-211ENST00000641213 GALNT3Q14435 633 aa17.15■□□□□ 0.34
PHGDH-211ENST00000641213 ALG1LQ6GMV1 187 aa17.15■□□□□ 0.34
PHGDH-211ENST00000641213 ACAD11Q709F0 780 aa17.15■□□□□ 0.34
PHGDH-211ENST00000641213 LMNTD2Q8IXW0 634 aa17.15■□□□□ 0.34
PHGDH-211ENST00000641213 DEFB107AQ8IZN7 70 aa17.15■□□□□ 0.34
PHGDH-211ENST00000641213 OR52K2Q8NGK3 314 aa17.15■□□□□ 0.34
PHGDH-211ENST00000641213 BLOC1S5Q8TDH9 187 aa17.15■□□□□ 0.34
PHGDH-211ENST00000641213 ANKRD49Q8WVL7 239 aa17.15■□□□□ 0.34
PHGDH-211ENST00000641213 TBATAQ96M53 351 aa17.15■□□□□ 0.34
PHGDH-211ENST00000641213 CDK5RAP1Q96SZ6 601 aaKnown RBP17.15■□□□□ 0.34
PHGDH-211ENST00000641213 CYP4F11Q9HBI6 524 aa17.15■□□□□ 0.34
PHGDH-211ENST00000641213 ARHGAP26Q9UNA1 814 aa17.15■□□□□ 0.34
PHGDH-211ENST00000641213 CDYLQ9Y232 598 aa17.15■□□□□ 0.34
PHGDH-211ENST00000641213 ACTL7AQ9Y615 435 aa17.15■□□□□ 0.34
PHGDH-211ENST00000641213 ARL5AQ9Y689 179 aa17.15■□□□□ 0.34
PHGDH-211ENST00000641213 ZFP37Q9Y6Q3 630 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-211ENST00000641213 KIF3CO14782 793 aa17.14■□□□□ 0.33
PHGDH-211ENST00000641213 WISP3O95389 354 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-211ENST00000641213 EPOP01588 193 aa17.14■□□□□ 0.33
PHGDH-211ENST00000641213 RPL17P18621 184 aaKnown RBP17.14■□□□□ 0.33
PHGDH-211ENST00000641213 KCNA5P22460 613 aa17.14■□□□□ 0.33
PHGDH-211ENST00000641213 PIK3R1P27986 724 aa17.14■□□□□ 0.33
PHGDH-211ENST00000641213 CDKN2DP55273 166 aa17.14■□□□□ 0.33
PHGDH-211ENST00000641213 GNA12Q03113 381 aa17.14■□□□□ 0.33
PHGDH-211ENST00000641213 PTPRCAPQ14761 206 aa17.14■□□□□ 0.33
PHGDH-211ENST00000641213 PDCD2Q16342 344 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-211ENST00000641213 MUM1Q2TAK8 710 aa17.14■□□□□ 0.33
PHGDH-211ENST00000641213 SLC8B1Q6J4K2 584 aa17.14■□□□□ 0.33
PHGDH-211ENST00000641213 CPSF7Q8N684 471 aaKnown RBP17.14■□□□□ 0.33
PHGDH-211ENST00000641213 OR7D4Q8NG98 312 aa17.14■□□□□ 0.33
PHGDH-211ENST00000641213 SCG3Q8WXD2 468 aaKnown RBP17.14■□□□□ 0.33
PHGDH-211ENST00000641213 CCDC28BQ9BUN5 200 aa17.14■□□□□ 0.33
PHGDH-211ENST00000641213 MAGEH1Q9H213 219 aa17.14■□□□□ 0.33
PHGDH-211ENST00000641213 ZNF385DQ9H6B1 395 aa17.14■□□□□ 0.33
PHGDH-211ENST00000641213 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.14■□□□□ 0.332e-10■□□□□ 9.2
PHGDH-211ENST00000641213 CDH22Q9UJ99 828 aa17.14■□□□□ 0.33
PHGDH-211ENST00000641213 A8MT66 165 aa17.14■□□□□ 0.33
PHGDH-211ENST00000641213 TMEM233B4DJY2 109 aa17.14■□□□□ 0.33
PHGDH-211ENST00000641213 BUD23O43709 281 aaKnown RBP17.14■□□□□ 0.33
PHGDH-211ENST00000641213 SNUPNO95149 360 aaKnown RBP17.14■□□□□ 0.33
PHGDH-211ENST00000641213 RBP1P09455 135 aa17.14■□□□□ 0.33
PHGDH-211ENST00000641213 ANPEPP15144 967 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms