RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 ACOX1Q15067 660 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 QPRTQ15274 297 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 COQ5Q5HYK3 327 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 AARS2Q5JTZ9 985 aaKnown RBP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 ZBTB41Q5SVQ8 909 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 GJC2Q5T442 439 aaPredicted RBP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 FSTL4Q6MZW2 842 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 XKR5Q6UX68 686 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 FAM183BPQ6ZVS7 135 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 USP43Q70EL4 1123 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 CHSY3Q70JA7 882 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 FBXO39Q8N4B4 442 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 SMG8Q8ND04 991 aaKnown RBP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 STAG3L4Q8TBR4 150 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 PRR11Q96HE9 360 aaPredicted RBP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 SLC4A9Q96Q91 983 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 TDRD1Q9BXT4 1180 aaKnown RBP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 OXCT2Q9BYC2 517 aaPredicted RBP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 IKZF4Q9H2S9 585 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 MMP27Q9H306 513 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 EXOSC4Q9NPD3 245 aaKnown RBP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 CACNA2D2Q9NY47 1150 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 MOCS1Q9NZB8 636 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 CD274Q9NZQ7 290 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 RIMS3Q9UJD0 308 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 CDH7Q9ULB5 785 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 IFT52Q9Y366 437 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 TNPO3Q9Y5L0 923 aaKnown RBP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 C2CD4BA6NLJ0 364 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 SYNCRIPO60506 623 aaKnown RBP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 VPS26AO75436 327 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 SLC22A3O75751 556 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 SNAPC5O75971 98 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 ALDH1A2O94788 518 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 CST1P01037 141 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 JCHAINP01591 159 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 YES1P07947 543 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 SMIM18P0DKX4 95 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 MBL2P11226 248 aaPredicted RBP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 ITGB5P18084 799 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 GSTM2P28161 218 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 POLD1P28340 1107 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 CD40LGP29965 261 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 HOXA10P31260 410 aaPredicted RBP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 MAPK10P53779 464 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 IST1P53990 364 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 ELP6Q0PNE2 266 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 FAM98CQ17RN3 349 aaKnown RBP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 HSDL1Q3SXM5 330 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 ZNF484Q5JVG2 852 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 UBAP2Q5T6F2 1119 aaKnown RBP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 SLC9A4Q6AI14 798 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 APOBEC3HQ6NTF7 200 aaKnown RBP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 ERAP2Q6P179 960 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 PKN3Q6P5Z2 889 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 CATSPER4Q7RTX7 472 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 CMC1Q7Z7K0 106 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 SLC41A1Q8IVJ1 513 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 CHERPQ8IWX8 916 aaKnown RBP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 FAM126BQ8IXS8 530 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 ATG16L2Q8NAA4 619 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 ZNF540Q8NDQ6 660 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 OR52B2Q96RD2 323 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 MMP19Q99542 508 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 HEPHQ9BQS7 1158 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 CLEC4MQ9H2X3 399 aaPredicted RBP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 VRTNQ9H8Y1 702 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 TMEM45AQ9NWC5 275 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 DSEQ9UL01 958 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 UBQLN1Q9UMX0 589 aaKnown RBP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 IPPQ9Y573 584 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 RGS5O15539 181 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 DYRK3O43781 588 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 GRIN3BO60391 1043 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 GLP2RO95838 553 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 CALCAP01258 141 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 STAG3L1P0CL83 205 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 CPB1P15086 417 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 L1CAMP32004 1257 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 SERPINH1P50454 418 aaKnown RBP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 ALDH3A2P51648 485 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 CDH15P55291 814 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 INHBEP58166 350 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 MRPS5P82675 430 aaKnown RBP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 GNA12Q03113 381 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 LIPEQ05469 1076 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 GRSF1Q12849 480 aaKnown RBP eCLIP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 TP53BP2Q13625 1128 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 TSNQ15631 228 aaKnown RBP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 ATP6AP1Q15904 470 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 FAM187BQ17R55 369 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 ZIK1Q3SY52 487 aaPredicted RBP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 FBXO43Q4G163 708 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 TRIQKQ629K1 86 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 GLYATQ6IB77 296 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 LLGL2Q6P1M3 1020 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 TRMT10BQ6PF06 316 aaKnown RBP5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 ZNF605Q86T29 641 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 CARM1Q86X55 608 aa5.04□□□□□ -1.6
HNRNPU-230ENST00000640657 ADGRF2Q8IZF7 708 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms