RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 CKMT1AP12532 417 aa25.39■■□□□ 1.66
VEGFA-230ENST00000640482 LIG3P49916 1009 aa25.39■■□□□ 1.66
VEGFA-230ENST00000640482 EIF2B5Q13144 721 aaKnown RBP25.39■■□□□ 1.66
VEGFA-230ENST00000640482 KDM7AQ6ZMT4 941 aa25.39■■□□□ 1.66
VEGFA-230ENST00000640482 MACC1Q6ZN28 852 aa25.39■■□□□ 1.66
VEGFA-230ENST00000640482 FAM181AQ8N9Y4 354 aa25.39■■□□□ 1.66
VEGFA-230ENST00000640482 APOLD1Q96LR9 279 aa25.39■■□□□ 1.66
VEGFA-230ENST00000640482 DNAJC7Q99615 494 aa25.39■■□□□ 1.66
VEGFA-230ENST00000640482 CAAP1Q9H8G2 361 aa25.39■■□□□ 1.66
VEGFA-230ENST00000640482 SPASTQ9UBP0 616 aa25.39■■□□□ 1.66
VEGFA-230ENST00000640482 DKK4Q9UBT3 224 aa25.39■■□□□ 1.66
VEGFA-230ENST00000640482 KLF15Q9UIH9 416 aa25.39■■□□□ 1.66
VEGFA-230ENST00000640482 SSU72P8A0A1W2PR75 194 aa25.38■■□□□ 1.65
VEGFA-230ENST00000640482 CFAP69A5D8W1 941 aa25.38■■□□□ 1.65
VEGFA-230ENST00000640482 K7ESM1 405 aa25.38■■□□□ 1.65
VEGFA-230ENST00000640482 TAF4O00268 1085 aa25.38■■□□□ 1.65
VEGFA-230ENST00000640482 MAFKO60675 156 aa25.38■■□□□ 1.65
VEGFA-230ENST00000640482 NEBLO76041 1014 aa25.38■■□□□ 1.65
VEGFA-230ENST00000640482 PEX5P50542 639 aa25.38■■□□□ 1.65
VEGFA-230ENST00000640482 DUSP3P51452 185 aaPredicted RBP25.38■■□□□ 1.65
VEGFA-230ENST00000640482 AGERQ15109 404 aa25.38■■□□□ 1.65
VEGFA-230ENST00000640482 FAM71BQ8TC56 605 aa25.38■■□□□ 1.65
VEGFA-230ENST00000640482 LMX1AQ8TE12 382 aa25.38■■□□□ 1.65
VEGFA-230ENST00000640482 SLC13A1Q9BZW2 595 aa25.38■■□□□ 1.65
VEGFA-230ENST00000640482 APOBEC3BQ9UH17 382 aaKnown RBP25.38■■□□□ 1.65
VEGFA-230ENST00000640482 A0A1W2PQ67 120 aa25.37■■□□□ 1.65
VEGFA-230ENST00000640482 TMEM110-MUSTN1A8MSY1 372 aa25.37■■□□□ 1.65
VEGFA-230ENST00000640482 TRAFD1O14545 582 aaPredicted RBP25.37■■□□□ 1.65
VEGFA-230ENST00000640482 PROSCO94903 275 aa25.37■■□□□ 1.65
VEGFA-230ENST00000640482 PRKCGP05129 697 aa25.37■■□□□ 1.65
VEGFA-230ENST00000640482 CLDN6P56747 220 aa25.37■■□□□ 1.65
VEGFA-230ENST00000640482 WSCD2Q2TBF2 565 aa25.37■■□□□ 1.65
VEGFA-230ENST00000640482 ZCCHC8Q6NZY4 707 aaKnown RBP25.37■■□□□ 1.65
VEGFA-230ENST00000640482 LRRC49Q8IUZ0 686 aa25.37■■□□□ 1.65
VEGFA-230ENST00000640482 PHACTR4Q8IZ21 702 aa25.37■■□□□ 1.65
VEGFA-230ENST00000640482 RFFLQ8WZ73 363 aa25.37■■□□□ 1.65
VEGFA-230ENST00000640482 TBATAQ96M53 351 aa25.37■■□□□ 1.65
VEGFA-230ENST00000640482 NUDCD1Q96RS6 583 aa25.37■■□□□ 1.65
VEGFA-230ENST00000640482 SCUBE2Q9NQ36 999 aa25.37■■□□□ 1.65
VEGFA-230ENST00000640482 NCKIPSDQ9NZQ3 722 aa25.37■■□□□ 1.65
VEGFA-230ENST00000640482 AKR1B10O60218 316 aa25.36■■□□□ 1.65
VEGFA-230ENST00000640482 SOCS5O75159 536 aa25.36■■□□□ 1.65
VEGFA-230ENST00000640482 PEX11BO96011 259 aa25.36■■□□□ 1.65
VEGFA-230ENST00000640482 GJC1P36383 396 aa25.36■■□□□ 1.65
VEGFA-230ENST00000640482 TARDBPQ13148 414 aaKnown RBP eCLIP25.36■■□□□ 1.653e-6■■■■□ 20.1
VEGFA-230ENST00000640482 ASTE1Q2TB18 679 aaPredicted RBP25.36■■□□□ 1.65
VEGFA-230ENST00000640482 FAXCQ5TGI0 409 aa25.36■■□□□ 1.65
VEGFA-230ENST00000640482 MARC1Q5VT66 337 aa25.36■■□□□ 1.65
VEGFA-230ENST00000640482 VSTM4Q8IW00 320 aa25.36■■□□□ 1.65
VEGFA-230ENST00000640482 CACTIN-AS1Q8N1I8 211 aa25.36■■□□□ 1.65
VEGFA-230ENST00000640482 IL12RB2Q99665 862 aa25.36■■□□□ 1.65
VEGFA-230ENST00000640482 MGME1Q9BQP7 344 aa25.36■■□□□ 1.65
VEGFA-230ENST00000640482 PACSIN1Q9BY11 444 aa25.36■■□□□ 1.65
VEGFA-230ENST00000640482 ZFHX4Q86UP3 3567 aa25.36■■□□□ 1.65
VEGFA-230ENST00000640482 TPP1O14773 563 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 KRT7P08729 469 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 CD48P09326 243 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 ELFN1P0C7U0 828 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 CR2P20023 1033 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 IL4RP24394 825 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 NFKBIAP25963 317 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 HTR1BP28222 390 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 MMP13P45452 471 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 BLKP51451 505 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 INSM1Q01101 510 aaPredicted RBP25.35■■□□□ 1.65
VEGFA-230ENST00000640482 SEMG2Q02383 582 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 PPARDQ03181 441 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 CYP4F3Q08477 520 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 MMRN1Q13201 1228 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 DPYSL3Q14195 570 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 PRRT3Q5FWE3 981 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 RALGPS1Q5JS13 557 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 DPPA4Q7L190 304 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 MAP7D3Q8IWC1 876 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 RBFAQ8N0V3 343 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 KCTD6Q8NC69 237 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 RNF214Q8ND24 703 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 ATL2Q8NHH9 583 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 NXPE2Q96DL1 559 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 ZNF670Q9BS34 389 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 ABHD10Q9NUJ1 306 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 SALL4Q9UJQ4 1053 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 CLCA2Q9UQC9 943 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 IGF2RP11717 2491 aa25.35■■□□□ 1.65
VEGFA-230ENST00000640482 PCCBP05166 539 aa25.34■■□□□ 1.65
VEGFA-230ENST00000640482 GP1BAP07359 652 aa25.34■■□□□ 1.65
VEGFA-230ENST00000640482 TMEM253P0C7T8 217 aa25.34■■□□□ 1.65
VEGFA-230ENST00000640482 ARSEP51690 589 aa25.34■■□□□ 1.65
VEGFA-230ENST00000640482 RALGDSQ12967 914 aa25.34■■□□□ 1.65
VEGFA-230ENST00000640482 MTM1Q13496 603 aa25.34■■□□□ 1.65
VEGFA-230ENST00000640482 INPP5AQ14642 412 aa25.34■■□□□ 1.65
VEGFA-230ENST00000640482 PDK2Q15119 407 aa25.34■■□□□ 1.65
VEGFA-230ENST00000640482 LIPIQ6XZB0 460 aa25.34■■□□□ 1.65
VEGFA-230ENST00000640482 PGBD5Q8N414 524 aa25.34■■□□□ 1.65
VEGFA-230ENST00000640482 SPOCK2Q92563 424 aa25.34■■□□□ 1.65
VEGFA-230ENST00000640482 APOOQ9BUR5 198 aa25.34■■□□□ 1.65
VEGFA-230ENST00000640482 ARID1BQ8NFD5 2236 aaPredicted RBP25.34■■□□□ 1.65
VEGFA-230ENST00000640482 TTC24A2A3L6 582 aaPredicted RBP25.33■■□□□ 1.65
VEGFA-230ENST00000640482 HTRA2O43464 458 aaPredicted RBP25.33■■□□□ 1.65
VEGFA-230ENST00000640482 MFAP3LO75121 409 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms