RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 TLDC1Q6P9B6 456 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 HERC6Q8IVU3 1022 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 TEX26Q8N6G2 289 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 KCTD4Q8WVF5 259 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 FAM167BQ9BTA0 163 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 AGO1Q9UL18 857 aaKnown RBP15.2■□□□□ 0.02
TRIM3-215ENST00000639856 PLA2G4CQ9UP65 541 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 RUVBL2Q9Y230 463 aaKnown RBP15.2■□□□□ 0.02
TRIM3-215ENST00000639856 DENND4CQ5VZ89 1909 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 HEATR9A2RTY3 570 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 H0Y3Z8 333 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 CD86P42081 329 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 MAPKAPK2P49137 400 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 PRKAA2P54646 552 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 ERVFC1P60507 584 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 ITKQ08881 620 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 USP4Q13107 963 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 IHHQ14623 411 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 PARP15Q460N3 678 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 ACSBG2Q5FVE4 666 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 ACBD5Q5T8D3 534 aaPredicted RBP15.2■□□□□ 0.02
TRIM3-215ENST00000639856 VWA5B1Q5TIE3 1220 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 CEP97Q8IW35 865 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 MFSD6LQ8IWD5 586 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 HS6ST3Q8IZP7 471 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 FSTL5Q8N475 847 aaPredicted RBP15.2■□□□□ 0.02
TRIM3-215ENST00000639856 SLC25A41Q8N5S1 370 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 ARL14EPQ8N8R7 260 aaPredicted RBP15.2■□□□□ 0.02
TRIM3-215ENST00000639856 CFAP61Q8NHU2 1237 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 STYXQ8WUJ0 223 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 RANBP9Q96S59 729 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 TCF25Q9BQ70 676 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 MCOLN1Q9GZU1 580 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 COG4Q9H9E3 785 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 FBXO5Q9UKT4 447 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 ACTL7AQ9Y615 435 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 HIDE1A8MVS5 230 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 TARM1B6A8C7 271 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 TSPAN3O60637 253 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 GJB3O75712 270 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 MMP2P08253 660 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 CRABP2P29373 138 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 CD151P48509 253 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 SERPINH1P50454 418 aaKnown RBP15.19■□□□□ 0.02
TRIM3-215ENST00000639856 CYP4F8P98187 520 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 TNK2Q07912 1038 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 MTA1Q13330 715 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 CFAP157Q5JU67 520 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 NEPROQ6NW34 567 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 EPGNQ6UW88 154 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 KIAA0408Q6ZU52 694 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 GAREM2Q75VX8 874 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 PGBD5Q8N414 524 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 TTC16Q8NEE8 873 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 OR7D4Q8NG98 312 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 WDR60Q8WVS4 1066 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 SCYL1Q96KG9 808 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 DRC3Q9H069 523 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 ILKAPQ9H0C8 392 aaPredicted RBP15.19■□□□□ 0.02
TRIM3-215ENST00000639856 UXTQ9UBK9 157 aaPredicted RBP15.19■□□□□ 0.02
TRIM3-215ENST00000639856 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.19■□□□□ 0.02
TRIM3-215ENST00000639856 TLL1O43897 1013 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 TM7SF2O76062 418 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 RPSAP08865 295 aaKnown RBP15.19■□□□□ 0.02
TRIM3-215ENST00000639856 GLRBP48167 497 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 PPP3CCP48454 512 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 SMAD3P84022 425 aaKnown RBP15.19■□□□□ 0.02
TRIM3-215ENST00000639856 DSC2Q02487 901 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 CREMQ03060 361 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 IL10RBQ08334 325 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 ZNF460Q14592 562 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 TSTD2Q5T7W7 516 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 LRRC8EQ6NSJ5 796 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 LILRA6Q6PI73 481 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 ITIH5Q86UX2 942 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 GPR65Q8IYL9 337 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 TDRD5Q8NAT2 981 aaKnown RBP15.19■□□□□ 0.02
TRIM3-215ENST00000639856 ADAMTS19Q8TE59 1207 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 FAM161BQ96MY7 647 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 SLC4A7Q9Y6M7 1214 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 CHD9Q3L8U1 2897 aa15.19■□□□□ 0.02
TRIM3-215ENST00000639856 PRAMEF11O60813 436 aa15.18■□□□□ 0.02
TRIM3-215ENST00000639856 C8AP07357 584 aa15.18■□□□□ 0.02
TRIM3-215ENST00000639856 GJA1P17302 382 aa15.18■□□□□ 0.02
TRIM3-215ENST00000639856 GABRR2P28476 465 aa15.18■□□□□ 0.02
TRIM3-215ENST00000639856 CTNNB1P35222 781 aa15.18■□□□□ 0.02
TRIM3-215ENST00000639856 GRIA4P48058 902 aa15.18■□□□□ 0.02
TRIM3-215ENST00000639856 YBEYP58557 167 aaPredicted RBP15.18■□□□□ 0.02
TRIM3-215ENST00000639856 TAS2R39P59534 338 aa15.18■□□□□ 0.02
TRIM3-215ENST00000639856 MXRA7P84157 204 aa15.18■□□□□ 0.02
TRIM3-215ENST00000639856 MSLNQ13421 630 aaPredicted RBP15.18■□□□□ 0.02
TRIM3-215ENST00000639856 ADGRF1Q5T601 910 aa15.18■□□□□ 0.02
TRIM3-215ENST00000639856 PLPP4Q5VZY2 271 aa15.18■□□□□ 0.02
TRIM3-215ENST00000639856 SCUBE1Q8IWY4 988 aa15.18■□□□□ 0.02
TRIM3-215ENST00000639856 CALML6Q8TD86 181 aa15.18■□□□□ 0.02
TRIM3-215ENST00000639856 SP7Q8TDD2 431 aaPredicted RBP15.18■□□□□ 0.02
TRIM3-215ENST00000639856 KCNV2Q8TDN2 545 aa15.18■□□□□ 0.02
TRIM3-215ENST00000639856 TADA1Q96BN2 335 aa15.18■□□□□ 0.02
TRIM3-215ENST00000639856 RSRC1Q96IZ7 334 aaKnown RBP15.18■□□□□ 0.02
TRIM3-215ENST00000639856 ELMO2Q96JJ3 720 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms