RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 PCDH20Q8N6Y1 951 aaKnown RBP12.08□□□□□ -0.47
CAPN3-221ENST00000638141 PAPD5Q8NDF8 572 aaKnown RBP12.08□□□□□ -0.47
CAPN3-221ENST00000638141 TRPV3Q8NET8 790 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 GRAPLQ8TC17 118 aaPredicted RBP12.08□□□□□ -0.47
CAPN3-221ENST00000638141 DYNC2LI1Q8TCX1 351 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 FIG4Q92562 907 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 SLC10A4Q96EP9 437 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 DEPDC7Q96QD5 511 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 GDF15Q99988 308 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 CHID1Q9BWS9 393 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 GON7Q9BXV9 100 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 MUC13Q9H3R2 512 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 CAB39Q9Y376 341 aaPredicted RBP12.08□□□□□ -0.47
CAPN3-221ENST00000638141 PCDHGB1Q9Y5G3 927 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 TTC24A2A3L6 582 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-221ENST00000638141 OR5K3A6NET4 321 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 SNTNA6NMZ2 147 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 M0R3G1 203 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 NEMP1O14524 444 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 DAB1O75553 588 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 SRP72O76094 671 aaKnown RBP12.08□□□□□ -0.48
CAPN3-221ENST00000638141 CLIC3O95833 236 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 CCDC159P0C7I6 412 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 TRAPPC2P0DI81 140 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 TRAPPC2BP0DI82 140 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 TYK2P29597 1187 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 ETFBP38117 255 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 YAP1P46937 504 aaKnown RBP12.08□□□□□ -0.48
CAPN3-221ENST00000638141 NPTX2P47972 431 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 GTF2IP78347 998 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 RAD51Q06609 339 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 TOP3AQ13472 1001 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-221ENST00000638141 SEMA5AQ13591 1074 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 SQLEQ14534 574 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 ATAD3CQ5T2N8 411 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 GRTP1Q5TC63 336 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 NXNQ6DKJ4 435 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 LRRC8EQ6NSJ5 796 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 PMF1Q6P1K2 205 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 GLRX5Q86SX6 157 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 SLC51AQ86UW1 340 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 CDKL3Q8IVW4 592 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-221ENST00000638141 KIAA1958Q8N8K9 716 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 IL17RDQ8NFM7 739 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 JPH3Q8WXH2 748 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-221ENST00000638141 ROPN1LQ96C74 230 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 DACH2Q96NX9 599 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 MXRA8Q9BRK3 442 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 DSN1Q9H410 356 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 SPC25Q9HBM1 224 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 POLE4Q9NR33 117 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 WARS2Q9UGM6 360 aaKnown RBP12.08□□□□□ -0.48
CAPN3-221ENST00000638141 BAG5Q9UL15 447 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 PMF1-BGLAPU3KQ54 211 aa12.08□□□□□ -0.48
CAPN3-221ENST00000638141 TRPC5OSA6NMA1 111 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 CENPXA8MT69 81 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 VNN1O95497 513 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 TRUB2O95900 331 aaKnown RBP12.07□□□□□ -0.48
CAPN3-221ENST00000638141 HSD17B1P14061 328 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 DNAJB1P25685 340 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 SLC13A2Q13183 592 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 FRG1Q14331 258 aaKnown RBP12.07□□□□□ -0.48
CAPN3-221ENST00000638141 ACOX1Q15067 660 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 YIF1BQ5BJH7 314 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 MFSD14BQ5SR56 506 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 CMTR2Q8IYT2 770 aaKnown RBP12.07□□□□□ -0.48
CAPN3-221ENST00000638141 ARFGAP1Q8N6T3 406 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 URGCPQ8TCY9 931 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 SLC2A14Q8TDB8 520 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 HTRA1Q92743 480 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 MASTLQ96GX5 879 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 RDH12Q96NR8 316 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 TMEM246Q9BRR3 403 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 LHX5Q9H2C1 402 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 APOBEC3GQ9HC16 384 aaKnown RBP12.07□□□□□ -0.48
CAPN3-221ENST00000638141 MRM3Q9HC36 420 aaKnown RBP12.07□□□□□ -0.48
CAPN3-221ENST00000638141 GPBP1L1Q9HC44 474 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-221ENST00000638141 KMT5AQ9NQR1 393 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 ABCD2Q9UBJ2 740 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 SCAF8Q9UPN6 1271 aaKnown RBP12.07□□□□□ -0.48
CAPN3-221ENST00000638141 ERVH48-1M5A8F1 160 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 TSPAN9O75954 239 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 ALBP02768 609 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 APRTP07741 180 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 ARP10275 920 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 NPR1P16066 1061 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 ACVR2AP27037 513 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 ADORA2AP29274 412 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 YWHABP31946 246 aaKnown RBP12.07□□□□□ -0.48
CAPN3-221ENST00000638141 RFC2P35250 354 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 GP5P40197 560 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 ARL1P40616 181 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-221ENST00000638141 NRLP54845 237 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 MRPS15P82914 257 aaKnown RBP12.07□□□□□ -0.48
CAPN3-221ENST00000638141 TSPY1Q01534 308 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 RALGDSQ12967 914 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 POLD3Q15054 466 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-221ENST00000638141 TJAP1Q5JTD0 557 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 LIPMQ5VYY2 423 aa12.07□□□□□ -0.48
CAPN3-221ENST00000638141 TMEM198Q66K66 360 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms