RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 AP2S1P53680 142 aaPredicted RBP19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 RNF43Q68DV7 783 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 ZC3H7AQ8IWR0 971 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 CLUHO75153 1309 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 SLC20A2Q08357 652 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 SLC47A1Q96FL8 570 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 TBX22Q9Y458 520 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 BTN3A1O00481 513 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 AP5Z1O43299 807 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 PRKAB2O43741 272 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 PRKG2Q13237 762 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 FRRS1Q6ZNA5 592 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 ADGRF2Q8IZF7 708 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 PDE2AO00408 941 aaPredicted RBP19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 ETNPPLQ8TBG4 499 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 C1GALT1C1Q96EU7 318 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 MAGEL2Q9UJ55 1249 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 ACTL7BQ9Y614 415 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 PTPRTO14522 1441 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 PAPSS2O95340 614 aaPredicted RBP19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 RPA1P27694 616 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 CRY1Q16526 586 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 OGFRL1Q5TC84 451 aaPredicted RBP19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 GCNT7Q6ZNI0 430 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 ZNF709Q8N972 641 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 ADAM28Q9UKQ2 775 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 AXIN2Q9Y2T1 843 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 CPSF1Q10570 1443 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 SLC25A27O95847 323 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 ADGRG6Q86SQ4 1221 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 ZZZ3Q8IYH5 903 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 ITGB3P05106 788 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 ANXA5P08758 320 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 OR1E1P30953 314 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 ALG10BQ5I7T1 473 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 TCP10LQ8TDR4 215 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 RHBDF1Q96CC6 855 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 ZMYM5Q9UJ78 669 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 RAB26Q9ULW5 256 aa19.43■□□□□ 0.7
CACNA1A-257ENST00000638009 KLHDC7AQ5VTJ3 777 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 ADNP2Q6IQ32 1131 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 HTRA1Q92743 480 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 PRICKLE1Q96MT3 831 aaPredicted RBP19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 VPS45Q9NRW7 570 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 KIF13AQ9H1H9 1805 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 RHPN2P1A8MT19 583 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 KCNK1O00180 336 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 F8A1P23610 371 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 PTAR1Q7Z6K3 402 aaPredicted RBP19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 HIST1H2AAQ96QV6 131 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 A0A096LPK6 155 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 ABHD14A-ACY1A0A1B0GW23 586 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 SRRM3A6NNA2 597 aaPredicted RBP19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 MCAMP43121 646 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 FXR2P51116 673 aaKnown RBP eCLIP19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 GPR107Q5VW38 600 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 EFCAB12Q6NXP0 572 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 RIT2Q99578 217 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 LRMDAQ9H2I8 198 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 GRHL1Q9NZI5 618 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 SERPINA6P08185 405 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 ATXN1P54253 815 aaKnown RBP19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 ZNF730Q6ZMV8 503 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 ADAMTSL2Q86TH1 951 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 KATNAL2Q8IYT4 538 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 POC1BQ8TC44 478 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 TMEM121Q9BTD3 319 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 RCOR3Q9P2K3 495 aaPredicted RBP19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 KANSL3Q9P2N6 904 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 PRRC2BQ5JSZ5 2229 aaKnown RBP19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 HSBP1L1C9JCN9 74 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 KDM4BO94953 1096 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 CYP2F1P24903 491 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 SNAPC2Q13487 334 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 KLHL35Q6PF15 583 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 SNX32Q86XE0 403 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 COL26A1Q96A83 441 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 SEMA6AQ9H2E6 1030 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 TBCCD1Q9NVR7 557 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 PPM1BO75688 479 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 NADKO95544 446 aaPredicted RBP19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 C6orf222P0C671 652 aaPredicted RBP19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 DNASE1L1P49184 302 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 SYVN1Q86TM6 617 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 GLS2Q9UI32 602 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 NAALADL1Q9UQQ1 740 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 MAU2Q9Y6X3 613 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 TRMUO75648 421 aaKnown RBP19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 SCNN1BP51168 640 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 COLGALT1Q8NBJ5 622 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 MAP3K14Q99558 947 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 GIN1Q9NXP7 522 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 PCDHB12Q9Y5F1 795 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 PCDHGB7Q9Y5F8 929 aa19.42■□□□□ 0.7
CACNA1A-257ENST00000638009 FGF10O15520 208 aaPredicted RBP19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 CYP27B1O15528 508 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 SAGP10523 405 aaPredicted RBP19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 CTSEP14091 401 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 TSPAN5P62079 268 aa19.41■□□□□ 0.7
CACNA1A-257ENST00000638009 SLC5A9Q2M3M2 681 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms